Leopardus geoffroyi (Geoffroy's cat): 123610476
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Entry
123610476 CDS
T10761
Symbol
TSPEAR
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X1
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lgf03037
]
123610476 (TSPEAR)
04990 Domain-containing proteins not elsewhere classified [BR:
lgf04990
]
123610476 (TSPEAR)
Cilium and associated proteins [BR:
lgf03037
]
Other cilia and associated proteins
Stereociliary proteins
123610476 (TSPEAR)
Domain-containing proteins not elsewhere classified [BR:
lgf04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
123610476 (TSPEAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
123610476
NCBI-ProteinID:
XP_045357112
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All DBs
Position
C2:1907079..2066473
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AA seq
670 aa
AA seq
DB search
MSVLLMLCVPLLALATPGRGTRRWEPCTDLRPLDILAEALPPNGAAGGIRVTQANGVRGL
QLSAAAPHTMSFPASRIFFQCDLFPEEFSIVITLKVPSLPPKKNEYLFTVVTEESDGLLL
GLRYSPTRLHFLFLSQDAAGAWQTRVTFLSPALMDNQWHTLVLAVSEGSFSLTADCGVPA
DIMADVPFPATLSVRGARFFIGSRKRAKGLFTGLVRQLVLLPGSDATPRLCPCRSPELAV
LSIPPVLQGPPGKPEDNEVLKYPYETDLKVTLGSRPPCTKMEDAQFWFDASRKGLFLCVG
SQWVSVLAAKEKLDYVEEHQSLFTDSETLGIEVFAIPEAGLFVAAANRRATSAIYKWTDG
KFASYQNIPTHQAQSWRHFTIGKKVFLAVANFEPNDKGQEFSVIYKWSQRKLRFTPYQRV
PTHSARDWEAFEMAGEHFLAVANHREGDNHNIDSVIYKWNPRTRLFEANQTIATSGAYDW
EFFTVGPYSFLAVANAFNGTSTKVHSHLYVWLLGSFQLFQAFLTFGAADWEVFHIGERVF
LAVANSHSYDVEMEARNDSYVINSVIYELNVTAQTFVRFQEIPTCSALDWEFFSVGEDYF
LVVANSFDGNTFLVNSIIYRWQGYEGFVAVHSLPTFGCRDWETFRTAAGSYLVYSSAKEP
RSRVLKLRTG
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcctgctgatgctgtgtgtcccgctcctggccctggcgaccccgggccgaggc
acccggcgatgggaaccctgcacagacctgcgccccctggacatcctggcagaggccctc
cctccaaatggcgctgcgggcggaatcagggtgacacaggcgaatggcgtgcgaggactc
cagctctcggccgccgccccccacaccatgagcttccccgcatcgaggattttcttccaa
tgcgacctcttccctgaggaattttcgatcgtcataaccttgaaagttcccagtcttccc
cctaagaagaacgaatacctgttcactgtggtgacggaggagtctgacgggctgttgctg
ggtctgcggtactcgcccaccaggctgcacttcctgttcctcagccaggacgcggcgggg
gcctggcaaacccgcgtgaccttcctcagtcccgctctgatggacaaccaatggcacacg
ctggtcttggccgtgtccgaaggatccttttccctcaccgcggactgcggcgtccccgcg
gacataatggctgacgtgcccttcccggccaccctctcggtgcgaggagcccgattcttc
atcggcagccggaagagagccaaaggcctgttcacgggcctggtgaggcagctggtctta
ctgcctggctcagatgccaccccaaggctctgtccctgcaggagtcctgagctggctgtg
ctgtccatccccccagtcctgcagggccccccggggaagccagaagataatgaggtgcta
aaatatccctatgaaaccgacctgaaggtgactctggggtcccggcctccatgcaccaaa
atggaggatgcccagttctggtttgatgctagccggaaggggctgttcctgtgtgtgggc
agccagtgggtctccgtgttagcagccaaggagaagctggactacgtggaagaacatcaa
agcctgttcaccgactcggagacgctgggcatcgaggtctttgccatccccgaggccggg
ctcttcgtggcagccgccaaccgcagagccacgtccgccatctacaagtggaccgatggg
aagttcgcctcctaccagaacattcccacgcaccaggcacagtcctggagacacttcacc
attgggaagaaggtcttcctggctgtggctaattttgaaccgaatgacaagggccaggag
ttctctgtcatctacaaatggagccagaggaaactgaggttcacaccataccagagggtc
cccacccacagcgcccgggactgggaagccttcgagatggccggggagcacttcctggcc
gtggccaaccacagggaaggtgataaccacaacatcgacagcgtcatctacaagtggaac
ccgaggacccgactcttcgaggccaaccagaccattgccacctcgggcgcctacgactgg
gagttcttcaccgtggggccctactccttcctggcggtggccaacgccttcaacggcacg
tccaccaaggtgcactcccacctgtacgtctggctccttggctccttccagctgttccag
gccttcctgacgttcggcgccgcggactgggaggtgtttcacatcggagagagggtcttc
ctggccgtcgccaacagtcacagctacgacgtggaaatggaagcacgcaacgactcctac
gtcatcaactcggtcatctacgagctgaatgtcaccgcgcagaccttcgtcaggttccag
gagatccccacctgcagcgctctggactgggagtttttctcggtgggagaagattatttc
ctggtggtcgcaaactccttcgacgggaacaccttcctggtaaacagtattatttacagg
tggcagggctatgaagggttcgtggccgtgcacagcctcccgaccttcggctgcagagac
tgggagaccttccgcaccgcggcgggttcctacctcgtctactccagcgcgaaggagccc
cgctcccgggtgctgaagctgaggacggggtga
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