Leopardus geoffroyi (Geoffroy's cat): 123611127
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Entry
123611127 CDS
T10761
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03030
DNA replication
lgf03410
Base excision repair
lgf03420
Nucleotide excision repair
lgf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123611127 (RFC4)
03410 Base excision repair
123611127 (RFC4)
03420 Nucleotide excision repair
123611127 (RFC4)
03430 Mismatch repair
123611127 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgf03032
]
123611127 (RFC4)
03036 Chromosome and associated proteins [BR:
lgf03036
]
123611127 (RFC4)
03400 DNA repair and recombination proteins [BR:
lgf03400
]
123611127 (RFC4)
DNA replication proteins [BR:
lgf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123611127 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
123611127 (RFC4)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
123611127 (RFC4)
DNA repair and recombination proteins [BR:
lgf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123611127 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
123611127 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
DUF815
AAA_16
AAA_30
AAA_22
AAA_11
AAA_24
Mg_chelatase
RuvB_N
AAA_28
SLFN-g3_helicase
AAA_19
AAA_5
ResIII
Viral_helicase1
AAA_7
Motif
Other DBs
NCBI-GeneID:
123611127
NCBI-ProteinID:
XP_045358603
LinkDB
All DBs
Position
C2:80967385..81000171
Genome browser
AA seq
377 aa
AA seq
DB search
MSAPVAPVRRMGEVTMQAFLKGTSVSTKPPLKDRVAATAGSSGENKKAKPVPWVEKYRPK
CVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLE
LNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTM
EKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIADKEHVKISNEGI
AYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAETIDGLFAACQSGSFD
KLEGVVKNLIDEGHAATQLVNQLHDVVVENDNLSDKQKSIITEKLAEVDKCLADGADEHL
QLISLCATVMQQLTQNC
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccccgtcgctcccgttcgcagaatgggtgaagtaaccatgcaggcttttcta
aaaggcacatctgtgagtactaaaccaccactgaaggatcgagtagctgccacagctgga
agcagtggagagaacaagaaagccaaacctgttccgtgggtggaaaaatatcgcccaaaa
tgtgtggatgaagtcgctttccaggaagaagtggttgcagtactgaaaaagtctttagaa
ggagctgatctccctaatctcttgttttatgggccacctggaactggaaaaacatccact
attctggcagcagctagagagctttttgggcctgagttgtttcgattgagagttcttgaa
ttaaatgcatctgatgaacgtggaatacaggttgttagagaaaaagtgaagaattttgct
caattaactgtgtcaggaagtcgttcagatgggaagccatgtccaccttttaagattgtg
attctggatgaagcagattctatgacctcggctgctcaggcagctttacgacgtactatg
gagaaggagtctaaaaccacccgattctgtctcatctgtaactatgtcagtcgaataatt
gaacctctgacctctagatgttctaaattccgcttcaaaccactgtcagataaaattcaa
cagcagcgattactagacattgctgataaagaacatgtcaaaattagcaatgagggaata
gcttatcttgttaaagtgtcagaaggagacttaagaaaagctattacatttcttcaaagt
gctactcgattaacaggtggaaaggagataacagagaaggtgatcacagacattgctggg
gtaataccagctgagaccatcgatggattatttgctgcatgtcagagtggctcttttgac
aaactagaaggtgtggtaaaaaatttaatagatgagggccatgcagccactcagcttgta
aatcaacttcatgatgtggttgtagaaaacgataacctttctgacaaacagaaatccatc
atcacagaaaaacttgctgaagtagacaagtgcttagcggatggtgctgatgaacatcta
caactgatcagcctctgtgctactgtgatgcagcagttaactcagaattgctga
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integrated database retrieval system
