Leopardus geoffroyi (Geoffroy's cat): 123611367
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Entry
123611367 CDS
T10761
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123611367 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123611367 (DHX36)
03012 Translation factors [BR:
lgf03012
]
123611367 (DHX36)
Enzymes [BR:
lgf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123611367 (DHX36)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123611367 (DHX36)
Translation factors [BR:
lgf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123611367 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
NPHP3_N
DUF6782
AAA_23
ResIII
AAA_34
NACHT
Motif
Other DBs
NCBI-GeneID:
123611367
NCBI-ProteinID:
XP_045359160
LinkDB
All DBs
Position
C2:110402026..110451641
Genome browser
AA seq
1014 aa
AA seq
DB search
MSYDYHQSWGRDGGPRSSGGGYGGSYGGGHGGGHGGNRGSGGGGGGGGGGGGGRGGRGRH
PGHLKGREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNDKDSETQ
ISWFAPEDHGYGTEAPAESKPNSEKKLEDQEKKLINQEKRTFRIRDKYIDRDSEYLLQEN
EPDVTLDQQLLEDLQKKKSDPRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGC
GKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQI
RLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLL
NFRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVAEYLLEDIIEKIRYVPEQKEH
RSQFKRGFMQGHVNRQEKEEKEAIYKERWPDYVRELRKRYSASTVDVLEMIDDDKVDLNL
IAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQT
QVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA
NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYF
LSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCC
LDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEDARRRGF
RYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAV
ICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRT
SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELD
ILLQEKIESPHPVDWKDTKSRDCAVLSAIIDLIKTQEKASPRNFPPRFQDGYYS
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagagctggggccgcgatggcgggccccgcagctccggcggg
ggctatgggggaagctatggaggaggccatggagggggccatggagggaaccgaggctct
ggaggcggcggcggcggcggcggaggaggaggaggtggtcgaggcggccgaggccgacat
cccgggcacctaaaaggccgcgaaattggcttgtggtatgcgaagaaacagggtcagaag
aacaaggaagcggagaggcaggagagagctgtagtacacatggatgaacgtcgagaagaa
caaattgtgcagctgctgcattcagtccaagctaagaatgataaagattcggaaacacag
atatcctggtttgctcctgaagatcacggttacgggactgaagctcctgctgagagcaaa
ccaaactcagagaaaaaacttgaggaccaggaaaagaaattgataaatcaagaaaagagg
acatttagaatcagggacaaatatattgaccgagattctgagtatctcttgcaagaaaat
gaacctgatgtaaccttagaccaacaactattggaagatttacaaaagaaaaaaagtgac
cctcggtatattgaaatgcagcatttcagggaaaagctgccttcatatggaatgcaaaag
gaattggtgaatatgattgataaccatcaagtaacagtaataagtggtgaaactggttgt
ggaaaaactactcaagttactcagttcattttggataactacattgaaagaggaaaagga
tctgcatgcaggatagtttgtactcagccaagaagaattagtgccatttcggttgcagag
agagtggccgcagaaagggccgaatcttgtggcaatggtaatagtaccggataccagatt
cgtctccagagtcggttgccaaggaagcagggttctatcttatactgtacaacaggaatt
atccttcagtggctgcagtcagactcgcgtttgtccagtgttagtcatattgtgcttgat
gaaatccatgagagaaacctacagtcagatgttttaatgactgttattaaagatcttctc
aattttcgacctgacctgaaggtcatattaatgagtgcgacattgaatgctgagaaattt
tcagaatattttggtaactgtccaatgatacacatacctggttttacttttccggttgcg
gagtatcttttggaagatataattgaaaaaataagatatgttccagaacaaaaagaacac
aggtcccagtttaagaggggtttcatgcaagggcatgtaaacagacaagaaaaagaagaa
aaagaagcaatctataaagaacgctggccagattatgtaagggaactgcgaaaaaggtat
tctgcaagtactgtagatgttctggaaatgatcgatgatgataaagttgatctgaatttg
attgctgcccttatccgacacattgttttggaagaagaggatggtgcgatactggtcttc
ctaccaggctgggacaatatcagcactttacatgatctcttgatgtcacaagtgatgttt
aaatcagacaggtttattattatacccttacattcactgatgcctacggttaaccagaca
caggtatttaaaagaactcctcctggtgttcggaaaatagtaattgctaccaatattgca
gagactagcattaccatagatgatgtagtttatgtaatagatggaggaaaaataaaagag
acacactttgacacacaaaacaacatcagtaccatgtctgctgagtgggttagtaaagct
aatgccaaacaaaggaaaggtcgagctggaagagtgcagcctggtcattgctatcatcta
tataatggtcttagagcaagccttctggatgactatcaactgccagaaattttgagaact
cctctggaagagctttgtttacaaataaagattttaaggctaggtggaattgcttatttt
ctgagtaggttaatggatccaccatcagatgaagcggtgtcactctccataaaacacctg
atggaactgaatgctttggataaacaagaagaattgacaccccttggagtccacttagca
cgattaccagttgagccacacattggaaaaatgattctttttggagctcttttctgttgt
ttagacccagtactcaccattgctgctagtctcagcttcaaagatccctttgtcattccg
ttgggcaaagaaaagattgcagatgcaagaagaaaagaattggcaaaagataccaaaagt
gaccatctgacagttgtgaatgcatttgagggctgggaagatgctagacgacgtggtttc
agatatgaaaaagactattgctgggaatattttttgtcttcaaacacattgcagatgctg
cataacatgaaaggacagtttgctgagcatcttcttggagctggatttgtaagcagtaga
aatcctaaagatccaaagtctaatataaattcagataatgagaagataattaaagctgtc
atctgtgctggtttatatcctaaagttgctaaaatccgactaaatttgggtaaaaaaaga
aaaatggtcaaagtttacacaaaaactgatggactagttgctattcatcctaaatctgtt
aatgtggagcaaacagaatttcactacaactggcttatctatcacctgaagatgagaaca
agtagtatatacttgtatgactgcacagaggtttccccatactgtctcttgttctttgga
ggtgatatttccatccagaaggataatgatcaggaaactattgccgtagatgaatggatt
gtctttcagtctccagcaagaattgcccatcttgttaaggaattaagaaaagaactagat
atccttctgcaagagaagatcgaaagtccccatccggtagattggaaggacactaaatcc
agagactgtgcagtactgtcagctattatagacttgattaaaacacaggaaaaagcaagt
cccaggaactttccaccacgattccaggatggatattacagctga
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