Leopardus geoffroyi (Geoffroy's cat): 123611523
Help
Entry
123611523 CDS
T10761
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
Transcription factors [BR:
lgf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123611523 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
123611523
NCBI-ProteinID:
XP_045359509
LinkDB
All DBs
Position
A1:190107073..190143336
Genome browser
AA seq
768 aa
AA seq
DB search
MERARPEPPLQLRQLPRATPPRPLRPAPPQLPVEGTSFRAAGADLPASPPTPCAAAVTTV
ASSCGEAQSSSVQPAARRLLQVKSEQVLLLPPGPPLPQALEEGVVASPSPARLLQLRPEL
LLLPPPPPASDGAPCRPELHPVQPRALHVKAEKQEPGPGLDLSAGTGRPVEAGHRASREA
KVEGPGPTLDCRRGSEKKGRLEAEEVMRDAAKGGEGKNLVAIREGIIKTEEPERLREDCR
LGTEPASNGLIHGSKEVILGQPSSAFGPHQQDLRIPLTLHTVPPGARIQFQGPPPSELIR
LTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFM
VWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWV
YQPRPGKRKRFPLSVSNVFSGTTQNIVSTNPTTIYPYRSPTYSVVIPSLQNTITQPVGDA
TPAIQLPTPAVQHPSPISLFQPTVSSTAQVAVQAPSLPLRPALPPQRFAGPSQTDTHRLH
SGANRSVKRPTPVSLENTNRIPTSASTAHARFATSTIQPPKEYPSVSTCPRSAPIPQAPP
IPHSHVYQASPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSM
PECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERTHSEDSRSCESVDGTSYYNSHSHSGE
EYLNPMPQLDIGALENVFTAPTSTPSSIQQVNVTDSDEEDEEKVLRNL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccagagccgccgcttcagttgcgccaactgccgcgggcgaccccg
ccgcgcccgctccgtcctgctccgcctcagctgccggtggagggcacctcttttagggct
gcaggcgcggatctccctgcgtcgccgcccaccccgtgcgcggccgccgttacgaccgtg
gcctcgtcgtgtggggaagcccagtcgtcgagtgtacagcccgccgcacggcgactgctg
caggtcaagtcggaacaggtgttgctgctgccaccagggccaccactgcctcaggccctg
gaagaaggtgtcgttgcttcaccctcgccagcgaggctgctgcagctgaggcccgagctg
ctgctgctgccaccgccgccgcccgcgtccgacggcgccccctgcagacccgagctgcac
ccggtgcagccccgggcgctgcacgtcaaggccgagaagcaggagccagggccgggcttg
gatctgtcggcggggactggaaggcctgtggaggccggccatagggcctccagggaggcc
aaggtggaaggccccgggccaaccctcgactgccgccgtgggagcgagaagaagggcaga
ttggaagcggaggaggtcatgagggatgcagcgaaaggcggggaaggtaaaaacctggtg
gccatcagagaaggcatcatcaaaacggaggaacccgagagactccgcgaggactgcagg
ctgggcactgagcccgcatccaatggcctgatccatggcagcaaggaggtcatcctgggc
cagccatccagtgcctttgggccacaccagcaagacctcaggatccctttgactctacac
acagtcccccctggggcccggatccagtttcagggacctccaccttcagagttgatacgg
ttgaccaaggtccccttgacaccagtgcctattaaaatgcaatctttactggagccttct
gtaaaaattgaaactaaagatgtcccgctcaccgtgcttccctcagatgcaggaatacca
gatactcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcatttatg
gtttgggcaaggattcaccggccagcattagccaaagctaacccagcagccaacaacgca
gaaatcagtgtccagcttgggttagaatggaacaaacttagcgaagaacaaaagaagccc
tattatgatgaagcacaaaagattaaagaaaaacacagagaggaatttcctggttgggtt
tatcaacctcgtccagggaagcgaaaacgcttccctttaagtgtttccaatgtattttct
ggtaccacacagaatatcgtgtctacaaatcctacaacaatatatccttatcgctcacct
acctactctgtggtaattcccagcctacagaataccatcactcaaccagttggtgacgcc
acacctgccatccagctgcccacacctgcagtccaacacccaagccccatctcacttttc
cagcccactgtctccagtactgcccaggtggctgtccaggctccaagtctgcccctccga
ccggcactcccacctcagcgcttcgctgggccctcccagacagacacgcatcggctacat
tctggagccaatcgctctgtgaagagacccactcctgtctctctggagaacaccaacagg
attccaacaagtgcaagtactgcccatgccagatttgcaacctcaaccatccagcctccc
aaggagtatcccagcgtttccacttgtcccagaagtgctccaatcccccaggctcctcct
attccacactcacatgtttaccaggcttctccccttggccatccagccacattgtttggt
acaccaccgcgattctcttttcatcacccttacttcctacctggacctcactacttccca
tcaagcacgtgcccttatagtcggcctccctttggctatggaaattttccaagttcgatg
ccagaatgccttggttattatgaagacaggtaccaaaaacacgaggctatgttttcagct
ttaaatagagactatccttttagagactacccagatgaacgtacacacagcgaagattct
cggagttgtgagagcgtggatgggacttcttactataacagtcatagccacagtggggaa
gaatacttaaatcctatgcctcagctggacattggagccttagagaacgtcttcacagcc
ccaacgtcaactccctctagcatccagcaagtcaatgtcactgatagtgatgaggaggat
gaagaaaaagtgctcaggaatttataa
DBGET
integrated database retrieval system
