Lachnoanaerobaculum gingivalis: QJR73_00870
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Entry
QJR73_00870 CDS
T09491
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lgg
Lachnoanaerobaculum gingivalis
Brite
KEGG Orthology (KO) [BR:
lgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgg03019
]
QJR73_00870
Messenger RNA biogenesis [BR:
lgg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QJR73_00870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
WHE87597
LinkDB
All DBs
Position
184648..185595
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AA seq
315 aa
AA seq
DB search
MKFIESLKEGMHISEVYLCKSKTIAVSKTGKEYASLSLQDKTGSIDAKIWDLYSPGISDV
DAMTFVVVDAEVTSFNNTLQLKVARIREADAKEYTASDYVPVSKKDIEKMFAELKEKIKS
VKNPFLNKLLTAIFIDDLEFQSTFKASSAAKTVHHGFLGGLLEHTLGVVKLCEYFCDNYE
SLNHDLLITSALCHDIGKTRELSAFPANDYTDEGQLVGHIVIGVEILKAQIDKIPGFPKK
ISNELIHCILAHHGELEYGSPKKPALIEALALNLADNADAKMETFIELLAQGQEGATGWL
GYNKLLESNYRKTSV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgaaagcttaaaagaaggaatgcatatttcagaggtttatctgtgtaaa
tcgaaaactattgcagtatcaaagacaggtaaggaatatgccagcctcagtttgcaagac
aagacaggaagcattgacgcaaagatatgggatctgtattccccgggtatctctgatgta
gatgctatgacctttgtagtggttgacgctgaagttacatcttttaacaacaccttgcag
ctgaaagttgcaaggataagggaagctgatgcaaaggaatataccgcatcggactatgta
cctgtatcaaaaaaagacattgaaaaaatgtttgcggagttaaaagaaaagataaagtca
gtgaagaatcctttcttaaataagcttttgacagctatttttatagatgaccttgaattt
caatctacatttaaagcatcatcggcagccaagacagtgcatcacggattccttggagga
ttacttgagcatactctgggagtggttaagctttgtgagtatttttgcgataattatgag
tcattaaatcatgatcttctcatcacatccgcactctgtcatgatataggaaagaccaga
gagttgtcggcatttccggcaaatgattataccgatgagggccagctggtaggacatata
gtaataggtgttgagatattaaaagctcaaattgataaaattccgggatttccgaagaag
atttcaaatgagctgatacattgtatactggcacatcacggagagcttgaatacggctca
ccaaagaaacctgcacttatagaggctttggcacttaatttggcagataatgcggatgca
aagatggagacgtttattgagctgttggcacagggacaggaaggagctacgggatggctc
ggttataataagttacttgagagtaattacagaaaaacaagtgtataa
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