Lachnoanaerobaculum gingivalis: QJR73_02800
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Entry
QJR73_02800 CDS
T09491
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lgg
Lachnoanaerobaculum gingivalis
Pathway
lgg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lgg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QJR73_02800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgg03021
]
QJR73_02800
03400 DNA repair and recombination proteins [BR:
lgg03400
]
QJR73_02800
Enzymes [BR:
lgg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QJR73_02800
Transcription machinery [BR:
lgg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QJR73_02800
DNA repair and recombination proteins [BR:
lgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QJR73_02800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
MukB
RAD51D_N
TfoX_C
Motif
Other DBs
NCBI-ProteinID:
WHE87957
LinkDB
All DBs
Position
576056..577009
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AA seq
317 aa
AA seq
DB search
MFDFEKPNIEISEISENKKFGRFICEPLERGYGTTLGNSLRRIMLSSLPGSAVSQVKIDG
VLHEFSSIPGVKEDVTEIIMNVKSLAIRNTSIDDEPKVAYIDFDGEGVITAEDIQCDPSI
EIINKDQVIATVSEGKFYMELTITNGRGYVSSDKNKGEDTPIGVIAIDSIYTPVERVNLL
VENTRVGQMTDFDKLTLDVTTNGTLAPDEAVSLAAKVLSEHLNLFIDLSDNAKTVDVMVE
KAEDDKEKVLEMNIDELELSVRSYNCLKRAGINTVEELCSRTSDDMMKVRNLGRKSLEEV
LLKLEELGLHLRESEES
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgattttgaaaaacccaatatagagatttcagaaatttccgagaataagaagttc
ggcagattcatatgtgaaccactggagagaggttatggaacaactttaggcaattcccta
agaagaatcatgctctcatccctccctggatcggctgtcagtcaggttaagattgacggc
gtgttgcatgaattttcttccataccgggagtaaaagaggatgtgacagagatcataatg
aatgtaaaaagccttgcaatcaggaatacatctattgatgatgagccgaaggttgcttat
atagattttgacggtgaaggagttatcactgcagaagatattcaatgtgatccaagtata
gaaatcattaacaaagaccaggttattgcaacagtttcagaaggcaagttctatatggaa
ttgacaataacaaacggtagaggttatgtaagttcagataaaaataaaggagaggatact
cctataggtgtgatagcaatcgattctatctatactcctgtagagagagtaaatcttctt
gtagagaatactcgtgtaggtcagatgacagactttgataagttaacacttgatgttact
acaaacggtacattggcacctgatgaggcggtaagtttagctgccaaagttttgagtgag
cacctcaatttatttatagatttgtctgataatgccaaaactgttgatgtaatggtagaa
aaagcagaggatgacaaggaaaaagttctggagatgaatatagatgaacttgaactgtca
gttagatcttacaactgtttgaagagagcaggaatcaatacagttgaagaactgtgttca
cgtacttcagatgatatgatgaaagtcagaaatctgggtagaaaatcattagaagaagtc
ttactaaagctggaagagcttggacttcaccttcgtgagagcgaagaatcataa
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