Lachnoanaerobaculum gingivalis: QJR73_03710
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Entry
QJR73_03710 CDS
T09491
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lgg
Lachnoanaerobaculum gingivalis
Brite
KEGG Orthology (KO) [BR:
lgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgg03032
]
QJR73_03710
03036 Chromosome and associated proteins [BR:
lgg03036
]
QJR73_03710
03400 DNA repair and recombination proteins [BR:
lgg03400
]
QJR73_03710
DNA replication proteins [BR:
lgg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QJR73_03710
Chromosome and associated proteins [BR:
lgg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
QJR73_03710
DNA repair and recombination proteins [BR:
lgg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
QJR73_03710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_bac_2
MADF_DNA_bdg
Chalcone_3
Motif
Other DBs
NCBI-ProteinID:
WHE88787
LinkDB
All DBs
Position
complement(782173..782472)
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AA seq
99 aa
AA seq
DB search
MFRRKKMNRTELIDAIAKKMDNSVTKKDLEATLKSFVEVVTEELAKKEKIQLVGFGTFET
SVRPAREGRNPRTGETMKIAESVVPKFKPGKALKDAVNK
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atttttaggaggaagaaaatgaatagaacagagttaatcgatgctattgctaagaagatg
gataattccgttacaaagaaggaccttgaggctacacttaagtcttttgtagaagttgtt
acagaagagcttgcaaagaaggaaaagatccagcttgttggttttggtacatttgagaca
tctgtaagacctgcaagagaaggaagaaacccaagaacaggtgagacaatgaagattgcc
gagagcgtagttccaaagttcaagccgggtaaggcactaaaggatgctgttaataaataa
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