Lachnoanaerobaculum gingivalis: QJR73_05835
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Entry
QJR73_05835 CDS
T09491
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lgg
Lachnoanaerobaculum gingivalis
Pathway
lgg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QJR73_05835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgg03400
]
QJR73_05835
Enzymes [BR:
lgg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QJR73_05835
DNA repair and recombination proteins [BR:
lgg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QJR73_05835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
PIF1
HHH_2
AAA_22
Helicase_RecD
NPHP3_N
nSTAND3
T2SSE
UvrD-helicase
SLFN-g3_helicase
AAA_28
SRP54
AAA
RsgA_GTPase
MeaB
KTI12
AAA_16
Zeta_toxin
TrwB_AAD_bind
UvrD_C
ABC_tran
Ribosomal_S13
Thymidylate_kin
DEAD
cobW
FtsK_SpoIIIE
AAA_14
Motif
Other DBs
NCBI-ProteinID:
WHE88519
LinkDB
All DBs
Position
1251102..1253336
Genome browser
AA seq
744 aa
AA seq
DB search
MSTVSGYIEKIIYRNETNGYTVLSVEADDDDYVLVGTFNYIAEGEFIKAKGNMKLHPNYG
EQLFVDEYEIIEPRELVSIQKYLESSAIKGVGEALAKRIVKKFKMDTLRVMEEEPERLAE
VKGVSEKLARSISEQIQEKKSMRDAMIFLQKFGISMKLSAKIYMEYGSKIYTIIETNPYK
LADDIDGIGFKIADDIAKKVGITADSKFRAVAGVEYILSNAMMSGHLYLPDTVLKDEFLD
LFGENIFDFDSLLSEMQMEKRIVVKKNEETQVYLSQCYYTELAVAKMLTDINIKAKYDIE
KIEEKILKIEDKEGIVLDDLQRQAVIESISNGLIIITGGPGTGKTTTINTIIKYFESEGE
SIALAAPTGRAAKRMSEATSYEAKTIHRLLEITPNNSDNSSNIGTHFERNEDNPLESDVL
IVDEVSMVDIFLMNALLKAVAIGTRLILVGDINQLPSVGPGTVLKDMIDSNCFNVVRLNK
IFRQSTGSDIVVNAHKIMTNEEIDLSKKSNDFIFIKQINPEHVMDSVISLVRDKLPSYVK
ASTNELQVMTPMRKGPLGVEVLNSFLQNKLNPASNSKKEKEYDATVFREGDKVMQIKNNY
QKEWFVYNEKHLPVDKGLGVYNGDTGIIKEIDMFSESFTICFDDGKVSNYEFSEFNEIEL
AYAITVHKSQGSEYPAVIIPVYKGPAMLMNRNLIYTAVTRAKKCVVLVGIPEVFYNMIQN
TKEMARYTGLKSKIIELSMLSKED
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagtatcaggctatatcgaaaaaatcatttataggaatgaaactaatggctat
actgtgctcagcgtggaggctgatgatgacgactatgtccttgtcggtactttcaactat
atcgctgaaggcgaatttataaaggcaaaaggaaatatgaagctgcatccaaactatgga
gagcagctttttgtcgatgaatacgaaatcatagagccgagagaacttgtcagtatacaa
aagtatctggaatcttccgcaataaagggtgtaggcgaggcactggcaaaaagaatagtt
aaaaagtttaagatggacactcttagagtgatggaagaagaacctgaaagactggctgaa
gtcaaaggtgtaagtgaaaagcttgcaagatcgataagtgaacagatacaggaaaaaaag
tccatgcgtgatgccatgatttttctacaaaagtttggaatcagtatgaagctttccgca
aagatatatatggaatacggcagtaaaatatatactataatagagaccaatccatataaa
cttgcagatgatatagacggtataggttttaagattgcagacgatattgccaaaaaagta
ggtattacagccgattccaagtttcgtgccgttgcaggagtggaatatattctttcaaat
gccatgatgtccggacatctatatctgcctgatacggttttaaaagatgaattccttgat
ttattcggtgaaaatatatttgactttgattctttactttctgagatgcagatggaaaaa
agaatcgttgtgaagaaaaatgaagaaactcaagtttatctttcacagtgctattatact
gaacttgctgtagcaaaaatgctgacggatatcaatataaaagcaaagtatgatatagaa
aagatagaagagaaaattctaaagattgaggacaaagaaggtattgttcttgatgacttg
caaaggcaggcggtaatagaatctataagcaacggtcttataataattaccggaggaccg
ggaacaggaaagactacaactataaatactattatcaaatactttgaaagtgaaggtgaa
agtattgcgctcgctgcacctaccggcagagcagcaaagaggatgtcggaagctacgtca
tatgaagcaaaaactattcacagacttttggaaataacaccgaataacagtgataattca
agcaatataggtactcattttgagagaaatgaggacaatccgctggagtccgatgtactt
atagtggatgaggtcagcatggtggatattttccttatgaatgcacttttaaaggctgta
gcaataggaaccagactgattctggtcggagatataaatcagctaccaagtgtaggaccg
ggaacagtgttaaaggacatgattgattcaaattgctttaatgttgtaagactgaataag
atattccgtcaatccacgggaagtgatattgtagtgaatgctcataagataatgacaaat
gaggaaattgatctaagtaaaaaaagtaatgattttatttttatcaagcagatcaatccc
gagcatgtaatggattcggtaatttcacttgtaagagataaacttccttcttatgtaaaa
gcatctacaaatgaacttcaggttatgacgcctatgagaaaaggtcctctaggagtggaa
gttttaaattcatttttacaaaacaaattaaatcccgcaagtaactcaaaaaaagaaaaa
gaatatgatgccaccgtctttagggaaggcgataaagtaatgcagataaaaaacaattac
caaaaagagtggttcgtatacaatgaaaaacatctgccggtggataagggacttggagtt
tacaatggtgataccggaataataaaagaaatagatatgttttcagaaagtttcactatt
tgttttgatgacggcaaagtttcaaattatgagttttcggagtttaatgagattgaactt
gcatatgccattacagttcataaatcacagggaagcgagtatccggctgtaattattcct
gtttataagggaccggcaatgctgatgaacagaaatcttatatatacagctgtcacaaga
gcaaaaaaatgcgtggtacttgtaggtattcctgaagtgttttacaatatgatacaaaac
acaaaggagatggcaagatataccggtttaaaatcaaaaataattgagctttcaatgtta
tctaaggaggactag
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