Lachnoanaerobaculum gingivalis: QJR73_08160
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Entry
QJR73_08160 CDS
T09491
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lgg
Lachnoanaerobaculum gingivalis
Pathway
lgg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QJR73_08160 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgg03400
]
QJR73_08160 (xseA)
Enzymes [BR:
lgg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
QJR73_08160 (xseA)
DNA repair and recombination proteins [BR:
lgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
QJR73_08160 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Baculo_PEP_C
LVIVD
Motif
Other DBs
NCBI-ProteinID:
WHE86267
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All DBs
Position
complement(1739641..1740819)
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AA seq
392 aa
AA seq
DB search
MVYSVSKVNAYIKNMFMQDFVLNKISVEGEVSNCTYANSNHIYFTIKDEGGTLSAVMFAG
QRGGLSFDMKRGQKVVVTGTISCYEKEGRYQLYANKIEEAGKGDLYEKYLELKEKLEDMG
MFDQIYKKEIPKFVQSIGVATAQTGAVINDIQNVSYRRNPYVRIVLAPCLVQGDAAAKSI
ISAIKKLDKMNLDVLIVGRGGGSIEDLYCFNDEELAKTIFNAKTPIISAVGHETDFTIAD
FVADLRAPTPSAAAEIANFIYNDYMYTLDVYNRKLTEQVERKIDYVKRDLDMLLIKLNTL
SPQIRIREQKQKLENFAKILENSFKSNLENKKIELANLGKRLDTVSPIKRLSGGYAYISD
NKNNKVLSAESLKPKDELNIYFSDGKVRAKVL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggtttattctgtatcaaaagttaatgcatatataaaaaatatgtttatgcaggacttt
gtactaaataagatatcggtagagggagaagtaagtaattgtacatatgcaaactctaat
catatatattttaccataaaggatgaaggagggaccttatctgcggttatgtttgccggt
cagagaggaggtctctcttttgatatgaaaagagggcaaaaggtagtcgttacgggaact
atatcctgctatgaaaaagagggcaggtatcagctttatgcaaataagatagaggaagcc
ggaaaaggtgatttatatgaaaaatatctggaacttaaagaaaagcttgaagatatgggg
atgttcgatcaaatctataagaaagaaataccgaagtttgtacagagtataggcgtggca
acagctcagaccggagccgtaataaatgatatacaaaatgtaagttacagaagaaatccc
tatgtcagaattgttttggctccatgccttgtacagggtgatgccgcagcgaaaagtatt
atttccgctataaaaaaactggataagatgaatctggacgttttgatagtgggaagaggc
ggaggctccatagaagatctttattgttttaatgatgaagaacttgcaaaaactattttt
aatgcgaaaactcctataataagtgctgtgggacatgaaaccgattttacaatagccgac
tttgtagcggatttgagagctcctaccccaagtgcggcggcggagattgcaaactttatc
tataatgactatatgtatacattggacgtctataatagaaagcttacagagcaagttgaa
agaaagatagattatgtaaaaagagatttagatatgcttcttataaagctgaatactctc
agtccgcagatacgtataagagaacaaaagcagaaactggaaaactttgcaaagatatta
gaaaatagttttaagagcaatttggaaaataaaaagatagaactggcaaacttaggtaag
aggcttgataccgtatcacctattaaaagattgtcaggcggctatgcatatataagtgat
aataaaaataataaagttttaagtgccgaaagtctaaaacctaaggatgaattaaatata
tatttttccgatggcaaggtaagagcaaaggtcttataa
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