Lachnoanaerobaculum gingivalis: QJR73_13225
Help
Entry
QJR73_13225 CDS
T09491
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lgg
Lachnoanaerobaculum gingivalis
Pathway
lgg00300
Lysine biosynthesis
lgg00470
D-Amino acid metabolism
lgg01100
Metabolic pathways
lgg01110
Biosynthesis of secondary metabolites
lgg01120
Microbial metabolism in diverse environments
lgg01230
Biosynthesis of amino acids
Module
lgg_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lgg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QJR73_13225
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QJR73_13225
Enzymes [BR:
lgg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
QJR73_13225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
BLACT_WH
PSI_PsaH
Motif
Other DBs
NCBI-ProteinID:
WHE87208
LinkDB
All DBs
Position
complement(2822441..2823712)
Genome browser
AA seq
423 aa
AA seq
DB search
MQKIPFLTLDKVREIVKTYPTPWHIYDEKGIRENAKKLNEAFSWNKGFKEYFAVKATPNP
FIMNILKECGCGMDCSSMTELELSDACGFRGKDIMFSSNETPIEEFKFANDLGAIINLDD
ITHIEYVEEICGKLPETMSARYNPGGVFTMSNGIMDNPGDAKYGMTPDQIIEAFNIMKSK
GVKYFGIHAFLASNTVTNEYYPKLAKELFEFAVRIKNECGICVSFINLSGGVGIPYTPDQ
EPNDIFEICKGVKKVYDEVLVANDIKDVAIFTELGRYMLGPYGALVTKAVHEKHTYKEYI
GVDACAVNLMRPAMYGAYHHLSVLGKEGKIAEHTYDVVGSLCENNDKFAIDRKLPKIDKG
DYIYIYDTGAHGFAMGYNYNGKLKSAELLLQEDGNVKLIRRAETDKDYFATFDFCDIMDK
YLK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaataccatttttgacattagataaagtaagagaaattgtaaaaacatatccg
acgccatggcatatatatgacgaaaaaggaatcagagagaatgcaaaaaaattaaatgaa
gcgttcagttggaataagggatttaaagaatactttgccgtaaaagccactccgaatcct
tttataatgaatatattaaaagaatgcggttgcggtatggactgttcttctatgacagag
cttgaattaagtgatgcatgcggttttagaggaaaagatataatgttttcctcaaatgaa
actcctatagaagaattcaagtttgcaaatgatctcggagcaataataaacttggatgat
atcacacatatagaatatgtagaagaaatttgtggaaaattgcctgagactatgagtgcc
agatataatcccggcggagtctttactatgtcaaacggtataatggacaatccgggagat
gccaaatacggcatgactccggatcagattatagaagcattcaatataatgaagtcaaaa
ggtgtaaagtacttcggtattcatgcatttcttgcaagcaatacggttacaaatgaatac
tatcctaaacttgcaaaggaactgtttgagtttgcggtaagaataaagaatgaatgcggt
atatgtgtaagctttataaatctgtcaggtggagtgggtataccatatacccccgatcaa
gagcctaatgatatatttgagatatgcaaaggtgtaaaaaaggtctatgatgaggtactt
gtagcaaatgatattaaagatgtcgctatatttacagagcttggaagatatatgcttgga
ccgtatggcgctttggtaacaaaagccgtacatgaaaagcatacatataaggagtatata
ggtgtggatgcctgtgcggtaaaccttatgcgacctgccatgtatggagcatatcatcac
cttagcgtacttggtaaggaaggaaaaattgcagaacatacatatgacgttgtaggttca
ctgtgtgaaaacaatgataaatttgctatagacagaaaacttccgaagatagataagggt
gattatatctatatttatgataccggagcacatggatttgcaatgggatataattataac
ggaaagttaaagtcggcagagcttttattacaggaagacggaaatgtaaaacttataaga
agagccgagactgataaggattactttgcaacctttgatttctgtgacattatggataaa
tatttgaaataa
DBGET
integrated database retrieval system