Lottia gigantea (owl limpet): LOTGIDRAFT_103494
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Entry
LOTGIDRAFT_103494 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgi03021
]
LOTGIDRAFT_103494
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_103494
Transcription machinery [BR:
lgi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
LOTGIDRAFT_103494
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
LOTGIDRAFT_103494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
S1
Spt6_S1
SH2
HHH_9
HHH_3
Tex_YqgF
S1_RRP5
Tex_N
Motif
Other DBs
NCBI-GeneID:
20229754
NCBI-ProteinID:
XP_009051772
JGI:
103494
UniProt:
V4ALE7
LinkDB
All DBs
Position
Unknown
AA seq
1520 aa
AA seq
DB search
MSDFLENEAEESERSSSEDDDDMSRKIKPKKQEKKKKKARIDDDDENDDDEELIEEMKDF
INEDVEDDEEGSGEEEGEGKRKHEDSDIDDQLEDDDYDLLEENLGIKVKRKAKRKRIRVM
SEDEDSDKEEAEAGTGGKQAIEDQLFEGIEEEGEDDARSVATAREATEGNDFGDLDEEEE
SDIDDFIVDDEGRPISKGKKKKHIIHSDRALQEAQDIFGVDFDIEEFADYDGESDEEDID
EEYEEEDEDGVARPKSKKQSRGRKTKKTIYDVFEPSELERGHFTDLDNEIKTADMPERFQ
LRQVPVLSAEEPELEEEAEWIYKQAFCTKPVSTQTLLEQDKGNDFNFDRRKGPEVTNKIK
KAIDFMRNQRLEVPFIAFYRREYVEPELNFADLWKVWNWDEKWTQLSQRKKNLVRLFEKM
QNFQYEVNSDVEKVLASSFRNLTEDDIEKVRKVQSIEELRDVYQHFLLYYGSEIPKMRNA
EKKKQTQEEMEKTGDEPEENNDSIKQASRKSGYSICQDSKLDEVARRFGLTPEQFGENLR
DNYQRHDVEQCPVEPLELAKDYVNRQFPTEEDVLMGARHMVAMQISHDPAVRKSVRQTFE
ERAKIKVVPTKKGMKEIDEAHCCYPMKYLKNKPVKDLKDDQYLKLHLAEEEGLLTISIMI
DEDGLTSSTYFEEVRQLFHRDEFSHLVQQWNTQRSEALKRALTKILYPQMEKELRMTLLA
ESKEGIKKSCARKLYWWLKVAPYQCDQLLYEDDYYDTDGLRVMGVGYSLEKIDNKDPSSF
CALIDGDGEVTDYLRLTHLTTRIKSWRQQDREGKVTDLEKLKEFISNKKPHVIAVTGESR
EALMIVDDLKKIITTLEEEEQLPPISVELMDNELALVYENTNKAAHDFREYPPVLRHAIS
LARRLQDPLIEFAQLCNADDDILCLKYHTYQNEINKDELREALYLELVNRVNECGVDVNR
ALAHPHTACLTQFICGLGPRKGSQLIKILKQNNSRLENRTQLVSLCHMGPKVFINCAGFI
KIDTNSLGHSTDTFVDALDGSRVHPEAYEWARKMAVDALEYDDSSEDANPAGALEEILER
PESLKELDLNAFAVELERQGYGDKRITLYDIRAELNHRYKELRSPYRPASVEERFNMITK
ETPDTFYVGKLVMAAVTGIAHKKPQGEQLDNANPVRDDETGLWSCPFCKQNDFQELSNVW
SHFDAGNCPGSAMGVKCRLDNSVTGFIPTKMISDKRVTNPEERVQPGMTIHCRITKIDIE
RFQVDLTCKSSDLADKDGNWKPKKDLYYDFDLEKDQSEKEEEKKKQKARQTYIKRVIVHP
SFHNISYAECEKLMANVEQGEVMIRPSSKGADHLTVTWKVADGILQHIDVREEGKENAFS
LGRSLLIGNEEFEDLDEIIARHVQPMAALARDILGFRYYRDSEGGKREILEKLLVVEKRK
GPSRIPYYLSASKAYPGKFLLSYMPRNKPRHEYISINPDGLRYRITNFHSLNSVVRWFKE
HFRDPIPGKVVITISILRGQ
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttttggaaaatgaagctgaagagtcagaaagaagtagctcagaagatgat
gatgatatgtcaaggaaaattaaacctaagaaacaagaaaaaaagaagaaaaaagccaga
attgatgatgatgatgaaaatgatgatgacgaagaattgatagaggagatgaaagatttt
atcaatgaagatgttgaagatgatgaagaaggtagtggtgaagaagaaggagaaggaaag
agaaaacatgaagattcagatattgatgatcagctagaagatgatgattatgatttactg
gaagaaaatctgggtattaaagttaaaagaaaggcaaagcgtaaacgtatccgtgtaatg
tcagaagatgaagacagtgataaagaagaagctgaagctggaacaggaggtaaacaagct
atagaagatcagctgtttgaaggtattgaagaggaaggagaagatgatgctagatctgta
gctacagctagagaagctactgaggggaatgattttggtgatttagatgaagaggaagaa
tcagatattgatgattttattgtggatgatgaaggaagacctattagtaaaggaaagaag
aagaaacacataattcatagtgacagagcgttacaagaagctcaagatatatttggtgta
gattttgatattgaggagtttgctgattatgatggtgagagtgatgaagaagatatagat
gaagagtatgaagaagaggatgaagatggagttgccagaccgaaatctaaaaaacaatca
cggggacgtaaaactaagaaaactatttatgatgtttttgagccaagtgagttagagaga
ggacattttacagacttagataatgaaattaaaactgctgatatgccagaaagatttcag
ttacgtcaagtacctgttttatcagctgaagaaccagaattagaagaagaagctgaatgg
atttataaacaagctttctgtactaaaccagtttcaacacaaacattactagaacaagat
aaaggaaatgactttaattttgatcgtagaaagggtccagaagtaaccaataagattaag
aaagctatagattttatgcgaaaccaaagattggaggtaccattcatagctttctataga
agagaatatgtggaaccagagctgaattttgcagatttatggaaagtctggaattgggat
gaaaagtggacacagttatctcagagaaagaagaatttagtccgattgtttgaaaagatg
cagaattttcaatatgaagtcaattctgatgtagaaaaagtcttggcttcatcatttaga
aatttaactgaagatgatattgaaaaggtacgtaaagtacaatctatagaagaactgaga
gatgtctatcaacatttcttactatattacggtagtgaaatacctaaaatgagaaatgct
gagaaaaagaagcagacacaggaagaaatggagaagactggagatgaaccagaagaaaat
aatgatagtatcaaacaagcctctagaaagagtggttattctatttgtcaagattctaaa
ttagatgaagtagccagaagatttggtttaacaccagaacaatttggtgaaaatttacga
gataattatcaaagacatgatgtagaacagtgtcctgttgaaccactagaattagctaaa
gattatgtcaatagacaatttccaacagaagaagatgtattaatgggcgctagacatatg
gttgccatgcagatatcacatgacccagcagttcgtaaatcagtcagacagacatttgag
gagagagctaagattaaagttgttcccaccaagaaaggcatgaaggaaatagacgaagct
cactgttgttatcctatgaaatatttaaaaaataaaccagtcaaagatttgaaagatgat
caatatctgaagttacatttggctgaagaagaaggcttactgactatctctattatgata
gatgaagatgggttaacatcatcaacatattttgaagaagtcagacagttatttcacaga
gacgaattcagtcatcttgtacagcaatggaacacacagagaagtgaagctttaaaaagg
gcattaactaagatattgtatcctcaaatggaaaaagaattacgaatgactttattggct
gaaagtaaagaaggaattaaaaagagttgtgcacgtaagttgtactggtggttaaaggta
gcaccatatcaatgtgatcaactgttatatgaagatgattattatgatactgatggtctc
agagtaatgggggttggttattctttagaaaagattgataataaagatccctcatcattc
tgtgctctaattgatggagatggtgaagtgacagattatttaagattaacacatcttact
actaggattaaatcatggagacaacaagacagagaaggaaaggtcacagatctagagaaa
ttaaaggaatttatatctaataaaaaacctcatgttatagctgtcactggagaatcaaga
gaggcattaatgatagtagatgatttaaagaagattattactacattagaagaagaagaa
cagttaccacctattagtgtggaattaatggataatgaattggctctagtctatgaaaat
accaataaagctgctcatgatttccgagaatatccaccagtattaaggcatgctatatca
ttagctagaagactacaagatccattgatagagtttgctcagctatgtaatgcagatgat
gatatcttatgtttgaaataccatacatatcagaatgaaataaataaagatgaactacgt
gaagctctatatctagagctagttaacagagtcaatgaatgtggtgtagatgtaaacagg
gctctagctcatcctcatacagcttgtttaacacaatttatttgtggtctgggtcctaga
aaaggctcacagttgataaagatattaaaacagaataacagtagattagaaaatagaact
cagctggtatcattatgtcatatgggacctaaagtttttattaactgtgctggttttatt
aaaatagacaccaatagtttaggacacagtactgacacttttgtggatgcattagatggt
tctcgtgttcaccctgaagcttatgaatgggctcgtaagatggcagtagatgctttagaa
tatgatgattcttcagaggatgctaatcctgctggggcactggaagaaatcttggaaaga
ccagagagtttaaaagaattagatttgaatgcctttgctgttgagttggaacgacagggt
tatggagataaacgtattacactttatgacattagagcagaattaaatcatagatataaa
gaattacgtagtccataccgtcctgcatctgttgaggagagatttaatatgatcaccaaa
gaaactcctgatacattttatgttggaaagttagtaatggctgcagtaactggtattgct
cataaaaaaccacaaggtgaacagttagataatgctaatcctgtacgagatgatgaaact
ggtttatggtcttgtccattctgtaaacaaaatgatttccaagaacttagtaatgtatgg
agtcattttgatgctggtaattgtccaggatcagctatgggtgtaaaatgtcggctagat
aattcagtgacaggttttatacccactaagatgatcagtgacaagagagtcacaaaccca
gaagaacgagtacagcctggaatgacaatacattgtagaataactaaaatagatatagaa
agatttcaagttgatttaacttgtaaatcatcagatttagctgataaagacggcaattgg
aaaccaaagaaagatctgtattatgattttgatttggagaaagatcagtctgaaaaagaa
gaagaaaaaaagaaacaaaaggctagacaaacttatattaaacgagttattgttcatcct
tccttccacaatataagttatgctgaatgtgagaaattaatggctaatgtagaacagggt
gaagttatgatacgaccaagtagtaagggtgctgatcatttaacagttacatggaaggta
gctgatggtatattacaacatatagatgtacgggaagaaggcaaagaaaacgcatttagt
ttaggaagatcattgttaataggaaatgaggaatttgaagatctggatgaaattatcgcc
cgacatgttcaaccaatggcagctctggccagagatattctcggcttcagatattacaga
gattcagaaggtggcaaaagagaaatcttagaaaaattattagttgttgaaaagaggaaa
ggtccttcaagaattccctattatttaagtgcatcgaaagcatatcctggtaaatttctg
ttatcttacatgcctcgtaataaaccacgtcatgaatatatctctatcaatcctgatggt
ttacgatatagaataactaattttcattccctcaactcagttgtacgatggtttaaagaa
catttccgtgaccctataccaggtaaggtggtaattactatttctatattgagagggcag
tga
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integrated database retrieval system