KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_109608
Entry
LOTGIDRAFT_109608 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03020  RNA polymerase
lgi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LOTGIDRAFT_109608
  09124 Replication and repair
   03420 Nucleotide excision repair
    LOTGIDRAFT_109608
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lgi03021]
    LOTGIDRAFT_109608
   03400 DNA repair and recombination proteins [BR:lgi03400]
    LOTGIDRAFT_109608
Transcription machinery [BR:lgi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     LOTGIDRAFT_109608
  RNA polymerase III system
   RNA polymerase III
     LOTGIDRAFT_109608
  RNA polymerase I system
   RNA polymerase I
     LOTGIDRAFT_109608
DNA repair and recombination proteins [BR:lgi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      LOTGIDRAFT_109608
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 20230490
NCBI-ProteinID: XP_009044314
JGI: 109608
UniProt: V4CQR2
LinkDB
Position
Unknown
AA seq 109 aa
MAGVLFEDIFDVKDIDPDGKKFDRVSRLFCESESFKMDLILDVNVQIYPVDLGDKFRLVV
ATTLREDGAPDDEYNPANTGPSRADQFEYVMYGKVYRIDGDDGSDASRL
NT seq 330 nt   +upstreamnt  +downstreamnt
atggcgggtgttttatttgaagatatttttgatgtcaaagacattgatccagatggcaaa
aaatttgacagagtatccagattgttctgtgagagtgaatcttttaaaatggacctgata
cttgatgttaatgtacagatctatcctgttgatctaggtgacaagttccgattagtggta
gcaactacactaagagaagatggtgctccagatgatgaatacaatccagctaataccggt
ccttctagagctgatcagtttgaatatgttatgtatggtaaagtttatcgtattgatggt
gatgatggttcggatgcttccagattgtaa

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