KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_110063
Entry
LOTGIDRAFT_110063 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LOTGIDRAFT_110063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lgi03041]
    LOTGIDRAFT_110063
Spliceosome [BR:lgi03041]
 Complex B
  Other components
   Prp19-related factors
    LOTGIDRAFT_110063
 Complex C
    LOTGIDRAFT_110063
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 Torus RRM_YTH1 zf_CCCH_4 RRM_3 zf-CCCH_2 Nup35_RRM_2 zf-CCCH zf-CCCH_4 RRM_occluded zf-CCCH_10 zf-CCCH_DUS3L RRM_PARP14_3 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 20230545
NCBI-ProteinID: XP_009045358
JGI: 110063
UniProt: V4B970
LinkDB
Position
Unknown
AA seq 355 aa
MATSKGANTYNRQNWEESEFPLLCQTCLGDNPYVRMMKEKHGKECKTCNRPFTVFRWCPG
ARMRFKKTEVCQTCSQMKNICQTCLLDLEYGLPVQVRDAALRVQDSLPKSDVNKEFYMQN
VEREIENSDGTNPVGAIANKVPSDMLLKLARTSPYYKRNRPHICSFWVKGECKRGEECPY
RHDKPTDPDDPLANQNIKDRFYGTNDPVADKLLRRYQDMPKLEPPEDETVTTLYVGGLSE
AIEVDDLKNHFYQFGEIRSVNVVQKQQCAFVQFTSRTSAEAAAEKSFNKLILKGQRLSIK
WGRSQGQQQSTKKDDEEEMSEHQRGQCRGKFFISIHRERGKGPRVSVHDSSDLCT
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggcaacaagtaaaggtgctaacacatataatcgacaaaattgggaagaatcagaattt
ccgttactatgtcaaacatgtcttggagacaatccatatgttcgaatgatgaaagagaaa
catggaaaagaatgtaaaacctgtaacagaccattcacagtatttagatggtgtccgggg
gccaggatgagattcaagaaaactgaagtctgtcaaacttgcagtcaaatgaaaaatatt
tgtcaaacatgtctcctagatttagaatatggcttacctgtccaagttagagatgctgct
ttaagagtacaagattctttacctaaatcagatgtaaataaggaattctacatgcagaat
gtggaaagagaaatagaaaacagtgatggaactaacccagttggtgctatagccaacaaa
gtacccagcgacatgttactaaaattagcccgaacctcgccctactacaaaagaaataga
ccccacatttgttctttctgggtgaaaggggaatgtaaaagaggagaagaatgcccatac
agacacgataagcctacagacccagatgatccattagcaaaccagaatattaaagacaga
ttttacggcactaatgatcctgttgctgataagttactacgtcgttatcaagacatgccc
aaactagaacccccagaggatgaaactgttaccacactttatgttggaggtctatctgaa
gcaatagaagtagatgatttgaagaaccacttttatcaatttggagaaattcgatcagtt
aatgttgtacagaaacagcagtgtgcttttgttcagttcacatcaaggacgagcgcagag
gctgcagctgaaaaatcgttcaataagctgatacttaaaggtcagaggttaagtattaaa
tggggtcgttcccaaggacaacaacaatcaacgaagaaagatgacgaggaagagatgtca
gaacatcaacgtgggcaatgcagaggtaagttttttatttctatacacagagaaagggga
aagggtccaagggtctctgtacatgactcatcagatctctgtacatga

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