KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_110121
Entry
LOTGIDRAFT_110121 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K12590  exosome complex component RRP46
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LOTGIDRAFT_110121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_110121
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     LOTGIDRAFT_110121
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 20230550
NCBI-ProteinID: XP_009045277
JGI: 110121
UniProt: V4CN34
LinkDB
Position
Unknown
AA seq 218 aa
MEVDSPNVELRPISCDLGHLSRSDGSATLTQGDTTVISAVYGPGDVRISKEIIDKATVDV
VYKPKTGLPKCEDKIKERIIRNSCETIILAGLHPRTCIEIILQEMQNCGSFLACCINSAC
LALLDASIPLKYLMGAVTCCVTNQGDITLDPTLREEKESVAGATFVFDSKDHNVITVSTY
GTLSTEQFQTILKTCREASKKVFEFYRESMLKKVSTCV
NT seq 657 nt   +upstreamnt  +downstreamnt
atggaagttgatagtccaaacgttgagctgcgtccaatttcttgtgacctaggccatcta
tcacgttcggacggatcggccacgctaacacaaggagatacaacagtgatatcagctgtt
tacggaccaggcgatgttagaatatcaaaagaaatcatagacaaagccacagtcgacgtt
gtttataagcccaaaactggtctgccaaaatgtgaagacaaaatcaaggaacggataatt
cgtaattcttgtgaaacgataattctagccggactacatcccagaacatgtattgaaata
attcttcaagaaatgcagaattgtggatcctttttagcttgttgtattaattcagcttgc
cttgctttactcgacgccagcatacctctaaaatatttaatgggtgctgtcacgtgctgc
gttacaaatcaaggggacattactctagatcctacgttacgtgaagagaaggaaagtgta
gctggagcgacatttgtatttgatagtaaagaccacaatgttataaccgtctcgacatac
ggtactttatcaactgaacaatttcaaaccatcttgaaaacttgccgtgaagcttccaaa
aaagtttttgagttttatcgtgagtccatgctgaagaaagtttctacatgtgtgtaa

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