Lottia gigantea (owl limpet): LOTGIDRAFT_110407
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Entry
LOTGIDRAFT_110407 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LOTGIDRAFT_110407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_110407
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
LOTGIDRAFT_110407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
SLFN-g3_helicase
AAA_22
ERCC3_RAD25_C
PhoH
Motif
Other DBs
NCBI-GeneID:
20230587
NCBI-ProteinID:
XP_009045234
JGI:
110407
UniProt:
V4BCA2
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
NLQNLPIVDVVVDPYLTCNLRPHQRDGILFLYQCIMGFKDYYGFGAILADDMGLGKTLQC
ITLLWTLLKQGPYGGKPVIKKALVITPGSLVKNWYAEFKKWLGKERLNIFAVSANQKVQE
YKSSNIYPVLIVSYEMFVQTYDLIKGENFDIVICDEGHRLKNTAIKTTSLIMSLGTRKRI
VLTGTPVQNDLQEFFSIVEFCNPNILGTSSAFRRVYEDPIVASRQPGSSREVVNLGEERG
AELSRLTSMFILRRTQEINNQYLPPKVELVLFCKPSQFQLEIYHQFLKSRSIRQCLLGCM
DGAPHLICIAALKQLCNHPRLVYDKAIQAAGPTDGEDLVESVYSGLSPLYPSDYDDQQLV
AEHSGKLMVLSAILTAVHHPASREKIVLVSNHTKTLNILEKFCRGENYKFVRLDGSTPTN
QRQDIVQKFNNKYSPESVFLLSSKAGGVGLNLIGASRLVLYDIDWNPANDLQAMARVWRD
GQKKKVHIYRLLTTGTIEEKVYQRQISKQGLSGAVIDLRNKSDVQFSREDLKDLFSLNES
TLCDTHTLLNCSCAGNGEDIKSPSICKTLVSRSCQLGQPQLSVKVGKNLSMDELHDWKHL
VGSHRDLNPDWYLQGLENYLSYIFYNETKNTEIL
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
aatcttcagaatctgccaatagttgatgttgtagttgacccctatttgacctgtaacctt
cgacctcatcagcgcgatggtattctcttcctgtaccaatgcatcatgggatttaaagat
tattatggttttggagctattctagcagatgatatggggctgggtaaaactctacaatgt
attacattattatggacgttattaaaacaaggtccatatggaggtaaacctgttattaaa
aaagctctggttataacaccaggtagtttagttaagaactggtacgctgagtttaagaaa
tggctaggtaaagaaaggttgaatatttttgcagtttcagcaaaccagaaagttcaggaa
tataaatcgtccaatatctatccagtattaatcgtatcctacgaaatgtttgtacaaacg
tatgatctaatcaagggagagaattttgatattgtaatttgtgacgagggacatcgatta
aagaatactgccattaaaactacttctttgattatgagtttaggaacaagaaagagaatt
gttttaactggtactcctgtacagaatgatttacaggaatttttctctattgttgaattc
tgcaatcccaatattctaggaacaagttcagcgtttcgtcgtgtgtatgaagatcctatt
gtagcgtctcgtcagcctggatcaagtcgagaagttgtaaatctaggtgaagaaagaggg
gcggagttatcacgattaacttccatgtttattttaagaagaactcaagaaattaacaac
caatatctacctcctaaagttgaattggtattattttgtaaaccaagtcagtttcaactg
gagatttatcatcagtttttaaagagtcgttcaatacgacagtgtttattaggttgtatg
gacggagcacctcatctcatctgtattgctgcattaaaacaactctgtaatcatccacgt
ttagtttatgataaagctatccaggctgccggaccaactgatggggaagatctcgtggag
tctgtatattctggattgtcccccttgtatccatcagattacgatgatcaacaactggta
gctgagcattctgggaagttaatggtattgtcggccatattaactgcggttcatcatcct
gctagtcgagaaaaaatagttctagtttcaaatcacactaagacgttaaatatactagag
aaattttgtcgtggagaaaattataaattcgtccgacttgatggttccacaccgaccaat
cagagacaagatattgtacagaaatttaacaacaaatactcgccagaaagtgtattttta
ttgagtagtaaagctggtggagtaggcttgaatctgattggtgcatctcgtctcgtactt
tacgatatagattggaatccagccaatgatcttcaggcgatggctcgagtatggagagat
ggacagaaaaaaaaagttcacatttacagattgttaactacagggacaatagaagagaaa
gtatatcagagacagatcagtaaacagggactgagtggggctgttatcgatctcagaaat
aaatcagatgttcagttttctagagaagatttaaaggatctgttttcactgaatgaatca
actctctgtgatacccatactctgttaaactgttcttgtgctggaaatggtgaagacatt
aaatcaccatcaatatgtaaaactctagtatccagatcttgtcaactaggacaacctcaa
ctatctgttaaggtagggaagaatttatcgatggatgagctacatgattggaaacattta
gttggttcacaccgggacctgaatcccgactggtatcttcaaggattagagaattattta
tcttatatcttttataatgaaactaaaaatacagagatattatga
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