Lottia gigantea (owl limpet): LOTGIDRAFT_110630
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Entry
LOTGIDRAFT_110630 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_110630
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
LOTGIDRAFT_110630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
20230610
NCBI-ProteinID:
XP_009046508
JGI:
110630
UniProt:
V4AZ91
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MNSYSCHSLIQNRIIQPKSHNSQKLFREKLLNASSLFHSDIKGHFGCVNAIEFSNNGGNM
IASGGDDRRVLLWNTQKAMWRKGSPSCMKSEHRSNIFCIAFDKDNEKIFSGGNDEQVFVH
DAATGNPVDNFMHEDAVYGLSTDPNNPHVFASACDDGRILIYDIREPADSEPFCLANYVS
SMHSVMYNPLDPRLVATANVREGIGLWDVRKPKSCIMRYGGEFEQQSCMSVRINNQGTQI
LALRRRLPPVIYNIDSKSPVVEFDHTGYFNSCTMKSCCFAGDRDQYILSGSDDFNVYMWA
IPPDLSTSNNFFCTGQYINKAHLVLKGHRSIVNQVRFNRDNGLIISSGVEKTIKAWCAFP
LNVPDEIEDNDELLNSNGERPVFTHEEYINLMLRSGHVMSHDYTQQSTEEDPRMMAFFDS
LVQREMESWSSSEEFSSNEEEL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaatagttacagctgtcactccttgatacagaaccgaataattcagcctaaaagtcac
aactcacaaaaattatttagagaaaaactactgaatgcctcaagtttgtttcacagtgat
ataaaagggcattttggttgtgtgaatgctatagaattctcaaataatggaggaaacatg
atagcttcaggaggagatgatagaagagtattattatggaatacacagaaagctatgtgg
agaaagggaagtccaagctgtatgaaatcagaacatagaagtaatatattttgtatagct
tttgataaagataatgagaaaattttctctggagggaatgatgaacaagtatttgtccat
gatgctgctacaggtaatccagtagataattttatgcatgaagatgctgtgtatggatta
tccacagatcccaataatccccatgtatttgccagtgcttgtgatgatggtagaatatta
atatatgatattagagaaccagctgattcagagccattctgtttagccaattatgtttct
tccatgcattctgtaatgtataaccctctagatccacgtctagtagcaacagctaatgtt
agagaaggcattggtttatgggatgttagaaaacccaaaagttgcattatgagatatggt
ggagaatttgaacaacaaagttgtatgagtgttagaattaacaaccagggtactcagata
ttagcgttgcgtagacgtttacctccagtcatatataatatagatagtaaatcaccagta
gtagagtttgaccatactggttattttaattcctgtacaatgaaatcttgctgctttgct
ggtgacagagatcagtatattttatctggttcagatgattttaatgtttatatgtgggct
attcctcctgatttatctaccagtaataattttttttgcacagggcagtatataaacaag
gctcacctggtattaaaaggccatagatcaattgtaaatcaagttagatttaacagagat
aatgggttaattatatcttctggtgtagaaaaaactatcaaggcatggtgtgcttttcca
ctgaatgtaccagacgaaatagaggataatgatgaattgttaaacagtaatggtgaacga
ccagtctttacacacgaggaatatattaatcttatgttacgaagtggacatgtaatgtca
catgactatacacaacaatctactgaggaggaccctagaatgatggcattctttgattct
ttagtacaacgtgagatggagtcttggagttctagtgaagagttttcaagtaatgaagag
gaactt
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