Lottia gigantea (owl limpet): LOTGIDRAFT_111616
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Entry
LOTGIDRAFT_111616 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14848
ribosome assembly protein RRB1
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_111616
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
LOTGIDRAFT_111616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_RIG_2nd
CAF1C_H4-bd
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
EIF3I
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
eIF2A
Beta-prop_WDR35_TULP_N
MIOS_WD40
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_RIG_1st
WD_LRWD1
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
20230753
NCBI-ProteinID:
XP_009048054
JGI:
111616
UniProt:
V4CH49
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MASENDNDVEMNEEENGSTSKPKRQVYLPGDEMEDGEQLVCDESAYHLYHQAQTDSPCLS
FDILSDHLGENREEYPHTCYMAAGSQTDGIKTNKIIVMKMSNLNETKKKDDDDDSDDDDD
EDDDPELETATVKHDGCVNRIRVSILGEKNVAATWSEKGKVYIWDLTRPINALNSSDVMG
EYTRTQESPQPIHVFKGHKTEGYALDWSKLSPGKLLSGDCKKDIHLWTPTASGWDVSKQP
FSGHTDSVEDIQWSPTEDNVFASCSVDKSIRVWDSRSAPKTACMLTTRKAHDSDINVIHW
NKNDPFIVSGGDEGTIKVWDLRQFQHGKPAALFKHHKSAITSVEWHPTDCSVFAASGEDN
QITLWDLAVERDGDNSQEPDIPPQLLFIHQGQTEIKELHWHSQIPGVIISTAISGFNVFR
TISV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgaaaatgacaacgatgttgaaatgaacgaagaagaaaatggatcaactagc
aaacctaaacgtcaagtttatttgccaggagatgaaatggaagatggagaacagttagtt
tgtgatgaatcagcttatcacttgtaccatcaggcccagacagattcaccctgtttaagt
tttgatatattgagtgatcatctgggagagaatcgtgaagaatacccccatacctgttat
atggctgctggtagtcagactgatggtattaaaactaataaaataattgtgatgaagatg
agtaatttaaatgaaactaagaagaaagatgatgacgatgacagtgatgatgatgatgat
gaagatgatgatccagaattagaaactgctacagtcaaacatgatggttgtgtcaataga
ataagggtaagtatactaggtgagaagaatgttgcagctacctggtcagagaagggtaaa
gtttatatctgggatttaaccagaccaattaatgctttaaacagttcagatgtgatgggt
gaatacactagaacacaagaatctccacaacctatacatgtatttaaaggtcataaaact
gaaggttatgctttagattggtccaaactatcaccaggtaaactattatctggtgactgt
aagaaagatatacatctatggacaccaacagcttcagggtgggatgttagtaaacaacct
ttttctggtcatactgattctgtagaagatattcaatggtctcctacagaagataatgtc
tttgcatcttgctctgttgataaatcaataagagtatgggattcgagatcagcaccaaaa
actgcctgtatgttaactacaaggaaagctcatgatagtgatatcaatgtgatacattgg
aataaaaatgatccatttattgtgagtggtggagatgaaggaactattaaagtttgggac
ctcagacaatttcagcatggtaaaccagcagcattattcaaacaccataaatcagccata
acatcagttgaatggcatcctactgattgttctgtatttgctgcatcaggagaagataat
cagataacattatgggatctagctgtagagagagatggagacaatagtcaggaaccagat
atcccccctcagttactatttatacatcaaggacaaactgagattaaagaactgcactgg
cattctcaaataccaggtgtgattattagtactgctattagtggttttaatgtgtttaga
acaatcagtgtgtaa
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