Lottia gigantea (owl limpet): LOTGIDRAFT_112482
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Entry
LOTGIDRAFT_112482 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K11373
elongator complex protein 1
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgi03016
]
LOTGIDRAFT_112482
Transfer RNA biogenesis [BR:
lgi03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
LOTGIDRAFT_112482
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
HB_ELP1
TPR_ELP1
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Se-cys_synth_N
Motif
Other DBs
NCBI-GeneID:
20230853
NCBI-ProteinID:
XP_009048848
JGI:
112482
UniProt:
V4A9R2
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
IVDIQYIPDLQALCIAVSDGTLIQWTVFNNELEEVGCVPSGIKTMCWSPDLELLILATGE
EKFILMTREYDPIIESPLQDEQFGEAEFVTVGWGKKETQFHGSAGKQAAQQKQKEITVAV
EGDDCKTRISWRGDDGLYFVTSFINKNTGARQLKVWTREGTLHSTSEPVDGLQQPLSWKP
SGSLIASAKKSDNKQEIIFFEKNGLRHGEFILPFQNGQIKVKELIWNIDSSILCVWCEDI
EHNSYVQLWTVNNYHWYLKQSLMFGDKEQVSAVHWDPEHTYRLHVTTRGGNYHQYTWTWV
TNSSSGTSDKDQALVGVIDGKNVLMTPFRKMVVPPPMSAYNLTLPQFVQQVMFCLEDQYS
NNIAVLLQDNTVAFYSYHISQGKECTGVNVTAAGGTGFSIKCQLPVFTGIYHIEGLESSQ
HPLSLYHTIWVKSDILVLITISEDGSCSTLYKTHVNSTNNKLDVKCKTDIENHVYNISKC
QASDNLVLQLIDGTLLQYDLESDSILPWVDSNGDEVKFPSPCSTLSVCKLGGQVVVLGLT
DRYRFYVNNIEVASNCSSFIVHSEFLLLTTLSHTLRCINLHTQLKDLPSLSDGKEHPFDE
SIRRVERGSRIVLVVPDDIKLILQMPRGNLEGIYPRALVLSAVRHHLDRFEYKKAYTIMK
KHRINMNLLYDHNPTLFLNHITDFIQQIDHVTDLNIIVTGLQEEDVTVTMYTAAYQQTNQ
KQDKKESESKVDVICDSIRSALNKLDADRFLLSILTTYVRKRKPELEAALELIQQLRENP
VKNKTVSAEEALKYLLFLVDVNELYNVALGTYDFDLVLMVAEKSQKDPKEYIPFLNELRR
LEDNYRKYSIDKHLRRFNKALQHISHCGPNHFNECLKLIEDQKLYVEGLKCYPISSSEYK
NIATNNGNYLLEKNRQDEAGVMFIKAEEWELALEAFITCKNWCQVFCMTALLGYTADREA
EIGRKLAVQLKESRQHREAAVIFEQYVKDIEEAIVTLIEGEQWDEALRLMYRYKRQDFVE
TNLKPALEEKIANELESLENLKSDYIKYKTRLGVVRNTKENERLAVLEGGVGNMGDSDLF
SDTSSAAGESVHSKYTYDSSRSTVFSKMTGKSRKRGSVRKWNLKEGSQFEDCALIEALAK
IITTVTGFKEDINSLLKILVQYNYDDKASDIQGEYDELLTIIDTSIDEIWSNTGQTTDTV
LGPNTTANSIAQAVQSGRQTTGSTDKLVLAVPPQYKKDVRWKLHMVQSSDS
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atagttgatatacagtatataccagatctacaggcattatgtatcgctgttagtgatggt
actttaatacagtggactgtctttaataatgagttagaagaagtaggatgtgtaccaagt
ggtataaaaaccatgtgttggagtccagatttagaacttctcattttagctacaggagaa
gagaagtttatattgatgacaagagagtatgatcctattatagaatcaccattacaagat
gaacagtttggagaagctgaatttgtaacagttggttggggaaaaaaggaaactcagttt
catggttcagcaggaaaacaggcagcacaacagaaacagaaagaaataactgtagctgtt
gagggtgatgattgtaaaactagaattagttggagaggagatgatggtctttattttgtt
acctcttttatcaataaaaatacaggagctcggcaattaaaagtatggacaagggaagga
actctacattctaccagtgaaccagttgatggtttacagcagccactcagttggaagcca
agtggaagtttgatagcctctgctaaaaaatcagacaacaaacaagaaataattttcttt
gagaagaatggattaagacatggtgaatttattctgccgtttcaaaatggacagatcaag
gtaaaagagttaatatggaatatagattctagtatattatgtgtttggtgtgaagatata
gaacataattcttatgttcaactgtggacagtaaataactatcattggtatttaaaacaa
tcattaatgtttggtgataaagaacaggtgtctgctgtacactgggatcccgaacatacc
tacaggttacatgttactaccaggggaggcaactatcatcaatatacctggacatgggtg
actaatagttcatctggtactagtgacaaagatcaggctttagttggcgtcatagatgga
aagaatgtattgatgacaccatttagaaagatggtagtacctccaccgatgtcagcctac
aatttaactctacctcagtttgtacagcaagttatgttttgtctagaggaccagtatagt
aataatatagctgtattattacaggataacactgtagctttctactcttatcatatatca
caaggtaaagaatgtactggtgttaatgtaacagctgctggtggaactgggttctctatc
aaatgtcaacttccagtatttactggcatttatcatatagaaggtttagaatctagtcaa
catccactgagtttatatcatactatctgggtaaaatcagatattctagtactgataact
atcagtgaggatggcagttgttctactctatataaaacacatgtaaattctaccaataac
aaactagatgtaaaatgtaagactgatatagaaaaccatgtttataatatcagtaaatgt
caggcctcagataatctggttttacaacttatagatggtaccttgttacagtatgatcta
gagagtgatagtattttaccgtgggttgacagtaatggagatgaagtaaagttcccgtca
ccatgctctactctatctgtatgtaaactagggggacaagtagtggtcctaggtctaaca
gatagatatagattttatgtcaacaatatagaggtagcatctaattgttcatcatttata
gttcattctgagtttttattgttaactacattgagtcatacattacgttgtattaatcta
catacacagttaaaagatttacccagtctatctgatggtaaagaacatccgtttgatgaa
tcaatacgacgtgttgagagaggatctcgtattgttttggtcgtaccagatgatattaaa
ctaatattacagatgcctcgtggaaacctggagggaatttatcctagagctttagtttta
tctgctgttagacaccatctagataggtttgaatataagaaagcctatactataatgaag
aaacatcgtattaatatgaacctactgtatgatcataatcctactttatttttaaatcat
attactgattttatacaacaaatagaccatgtgacagatttaaatattattgttactgga
ctacaagaagaagatgtaacagtgacaatgtatacagcagcttatcaacaaaccaatcag
aaacaagataagaaagaaagtgaaagtaaagttgatgttatctgtgattcgattcgttca
gctttaaataaactggatgctgataggtttttattgtctattctgacaacatatgtaaga
aaaagaaaacctgaacttgaagcagccttagaattaatacaacagttgagagaaaaccca
gtaaagaataaaacagtgagtgccgaggaagcgttgaaatatttactatttttagttgat
gttaatgaactttataatgtagctttagggacgtatgacttcgacttagttttaatggta
gctgaaaaatcacaaaaggaccctaaagaatatataccatttttaaacgaattacgtcgt
ttagaagataattatagaaagtatagtattgataaacatctgagacggtttaataaagct
ttacaacatatttcacattgtggacctaatcattttaacgagtgtttaaagttaatagaa
gatcagaagttatatgttgaagggttaaaatgttaccccatttcttcctcagaatataaa
aatattgctacaaacaatggtaattatttactagagaaaaacagacaagatgaggcaggt
gttatgtttattaaagctgaggaatgggaactggctctagaagcgtttataacctgtaaa
aactggtgtcaagtattctgtatgacagctctgttaggttatactgctgatagagaggct
gagataggtagaaaactagcagttcaattaaaagaaagtcgtcaacatcgagaagcagca
gttatatttgaacagtatgttaaggatatagaagaagcaatagtaactttgatagaagga
gaacaatgggatgaggcactcagattgatgtaccggtataaaagacaagattttgtggag
actaatcttaaaccagcactggaagaaaaaatagccaatgagttagaatcattagagaat
ttaaaatctgattatattaaatataaaactagactaggtgtagtgagaaatacgaaggag
aatgaaagactagctgtattagaaggtggagtgggcaatatgggggattctgatctgttc
tctgataccagtagtgctgcaggagagagtgtacatagtaaatatacatatgattccagt
aggtctactgtcttcagtaaaatgactgggaaatctcgaaagagaggttcagttagaaaa
tggaatctaaaagaaggaagtcagtttgaagattgtgctttgattgaagcattagctaaa
attattacaactgtcactggcttcaaagaagatataaatagtttattaaagatattagta
cagtataattatgatgataaagctagtgatatacagggagaatatgatgagttattaact
ataatagatactagtattgatgagatctggtctaatacaggacaaactactgatactgta
ttaggtccaaatacaacagctaattctatagcacaagctgtacaatcaggtagacaaaca
acaggttctacagataaattagtactggctgtaccaccacaatataaaaaagatgtaaga
tggaaattacacatggtacaatcatctgattcttga
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integrated database retrieval system
