Lottia gigantea (owl limpet): LOTGIDRAFT_113644
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Entry
LOTGIDRAFT_113644 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgi03016
]
LOTGIDRAFT_113644
Enzymes [BR:
lgi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LOTGIDRAFT_113644
Transfer RNA biogenesis [BR:
lgi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LOTGIDRAFT_113644
Prokaryotic type
LOTGIDRAFT_113644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
ARID
PRDM2_PR
Motif
Other DBs
NCBI-GeneID:
20230993
NCBI-ProteinID:
XP_009050003
JGI:
113644
UniProt:
V4B0C9
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MEETKKEIDSKSNEPPSKKQKTEIDNETNNEVKGEDNSPEKAVQKPITEEDVGITEYISD
HRGFSAIIKQRYSDFIVNEINSNGEIVHLTSFDLPQQEKVCETKLFETDVNVINEEDQKK
LHDMVENTDYEQSVLIQVFKDNKEARTKIHLAIREHYALLESSTVDGDNGKSKVIKVIYP
KSKAKRDSRWAASRPKYCKFVLYKENKDTMDTISLISKNMRLNANLFSYAGTKDKRAKTT
QEITVFKVEAERIKSLNDILRNMGFGNFQYVSSPLRLGQAKGNHFTIVLRNVEAENEVIE
KAVKSLKSKGFINYFGMQRFGTTTISTHDIGRAILLGNYELAVDLLLRPRDGDDESMVEC
RKIWQETKDSKEMLKKLPPHHSIEQNVLYVLSKHGANMFYNALQAIPRNTRLLYVHSYQS
YIWNTVVSKRIQLYGFNITEGDLKETPIFISKDNIDKYTIYDVVLPLPGYNMVYPQNNIG
ECYKEMLLKDSIELSTMRTKQREYSLSGTYRKILVKPNNVDKDILLYNDTTISLTTSDLD
RLNGEPEPISIPDGKFKALKIEFSLPPAAYATMALREILKINTSAAHQTTLNIS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaactaagaaagaaatagattccaagtctaatgaacctccaagtaaaaagcag
aaaactgaaatagacaatgaaactaataatgaagtcaaaggtgaagataattccccagag
aaggctgtacagaaacctattacagaagaagatgttggtattacagaatatatcagtgat
cacaggggattttccgctataatcaaacaaagatattcagattttatagtgaatgaaatt
aacagcaatggtgaaattgtccatttaacatcctttgatctgcctcaacaagaaaaggtt
tgtgaaactaagctttttgaaacagatgtaaatgtaattaatgaagaagatcagaaaaaa
ttacatgatatggtagaaaatacagattatgaacaatcagttttaatacaggtatttaaa
gacaataaagaagcccggaccaaaatacatttagctattcgagaacattatgccttacta
gaaagttctacagtggatggtgacaatgggaagtctaaagtaataaaagttatttatcca
aaatctaaagctaagcgggattccaggtgggcagctagcagacctaaatattgtaaattt
gttttatataaagaaaataaagatactatggatacaattagtttgatttctaaaaatatg
agactgaatgccaatctattttcctatgctggaacaaaagataaaagagctaaaacaaca
caagaaataacagtttttaaagtggaggctgagagaataaaaagtttaaatgatatcctg
agaaatatgggctttggaaatttccagtatgtgagttcaccgctgagactaggccaggct
aaaggaaaccattttactatagttttaaggaatgtggaagctgaaaatgaagtcatagaa
aaagctgtaaaatctctgaaatctaaaggttttattaattattttggtatgcagagattt
ggtacaacaacaatatctacacatgatataggaagagctatattacttggaaattatgaa
ctagctgtagatttattactgagacctagagatggtgatgatgagagtatggtagaatgt
agaaaaatatggcaagaaactaaagatagtaaagaaatgctaaaaaaattaccaccacat
catagtatagaacaaaatgttttatatgtgctttctaaacacggtgctaatatgttctat
aatgctttgcaggcaattcctcgtaatacccggttattatatgtacatagttatcagagt
tatatctggaatactgtggtatctaaacgtattcaattatatggtttcaatattactgag
ggagatctaaaggaaacaccaatttttataagtaaagataatatagataaatatacaata
tatgatgtagtattaccattacctggttataatatggtttatcctcaaaataatattggt
gaatgctataaagaaatgttactgaaagactctattgaattatctactatgagaacaaaa
caaagagaatattcattatctggtacatacagaaagatattagttaaacctaataatgta
gataaagatatattattatataatgatactactatatcattaactactagtgatttagat
agacttaatggtgaacctgaacctatatctataccagatggtaaattcaaagcattaaaa
atagaattttctctaccaccagcagcttatgctaccatggctcttcgtgaaatattaaag
ataaatacatcagctgctcatcaaacaacattaaatatttcctag
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