Lottia gigantea (owl limpet): LOTGIDRAFT_114344
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Entry
LOTGIDRAFT_114344 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_114344
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_114344
Enzymes [BR:
lgi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
LOTGIDRAFT_114344
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LOTGIDRAFT_114344
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
LOTGIDRAFT_114344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
Vgb_lyase
DUF5711
Invasin_D3
COLFI
PP_kinase_C
Cadherin-like
Big_1
Motif
Other DBs
NCBI-GeneID:
20231082
NCBI-ProteinID:
XP_009050917
JGI:
114344
UniProt:
V4ATH7
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MVTTEEEFENGELSSNRENHFGRWCNSCDEGSSASSICKNCNEYLCNNCVKAHQRVRLTK
DHYIETLSNGKYHSPSIPAPPSPILHYASDRPVNYCERHEIEVLRLYCDTCSQPICRECT
MTEHVGHSFIYLQDALENSKTITLKLVADAKAGIKAIEDSIHLTQGMGERIEGRAQAVTQ
EVRSTTRRYMAALEERERDLLRRIEKIRQVKAKSLHSQVDDLKLGLSSICQTVDEVEKML
NTGNDIDILKTKDKMVAEMQNMRKLRGYLEPHEDDNLVFTPPDTALYNAIGKLGFITSSA
CATNCIATGDGLKRSLKGKLAFFMVHSKDHHGEARVVGDDPIDVLIQSPEGAIYRTEVID
RHNGTYTVTYRPQTEGQHIISVTIRGKHIKDSPFTVTVRNGRNYITVGQMIHQFGSEGDG
PGQLCRPWGVCCDKDGNIIIADRSNNRVQIFNPDGTFKFKFGSAGSRNGQFDRPAGVACD
SQGRIVVTDKDNHRVQVFTSTGNFLFKFGEKGNKNGQFNYPWDVAIGSDGRMIVSDTRNH
RVQLFNSEGQFMNKYGFEGPLWKHFDSPRGVAFNNEGHIVVTDFNNHRLLVIHSDFQSAR
FLGTEGSGNGQFLRPQGVTVDQEGNIIVADSRNHRIQVFQPNGNFLCKFGSAGSGPGMMD
RPSGLCVNPDGLLIVIDFGNNRIQVY
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggttactacagaagaagaatttgaaaatggggagttgtcaagcaatcgagaaaatcat
tttggaagatggtgtaattcatgtgatgagggcagctcagcttcctcaatatgcaaaaat
tgtaatgaatacttgtgtaataattgtgtgaaggctcatcagagagtaagattgactaaa
gatcattatattgagacattgagtaatggaaaatatcattcacccagcatacccgcccca
ccctcccctattttacattatgcatcagatcgaccggttaactattgtgaacgtcatgaa
atcgaagtgttgagattatactgtgatacgtgctcacaacccatttgtcgagaatgtact
atgacagaacacgtcggacatagttttatctacctccaagatgcattagaaaactccaaa
accatcacattgaaacttgttgcagatgccaaagctggcattaaagcaattgaagatagc
attcatttaactcagggtatgggagaaagaattgaaggcagggctcaggctgtaactcag
gaagtacgatcaactactagaagatatatggcagctcttgaagaacgtgaacgagactta
ttacgacgaattgaaaaaattcgacaagttaaagccaaatccttacattctcaagtcgat
gatctcaaactaggcctctcatctatttgtcaaacagtggatgaggtagagaaaatgtta
aatacgggtaatgacatagacattctcaagaccaaagacaaaatggtggcagaaatgcag
aacatgagaaaattacgtggttatttagagccccatgaagatgataacttagttttcact
ccgcctgatacagctctgtataatgctattggtaaattaggcttcattaccagtagtgct
tgtgcaaccaattgtatcgcaacaggagatgggttaaaaagatctttgaaaggcaagctt
gctttcttcatggtacattctaaagatcatcatggtgaggctagagtggtaggagatgac
ccaatcgatgttcttattcagagtccagagggtgccatttacagaacagaggtgatagat
cgtcataatggtacatatacagtaacttacagacctcaaacagaaggtcaacatataata
tcggtcactattagaggcaaacacattaaagatagtccgtttacagtgacagtaagaaat
ggtagaaactatattacagttggtcagatgattcaccagtttggatctgaaggagatgga
ccagggcagctgtgtagaccttggggggtttgttgtgataaagatggaaatatcatcata
gctgatcgaagtaataaccgtgtacaaatattcaatccagatggaactttcaagttcaaa
tttggatctgcaggttccaggaatggtcaatttgatcggccagctggagtagcctgcgat
tctcagggaagaattgttgtaacagacaaagacaatcatagggtccaagtcttcacatct
acaggcaattttctatttaagtttggtgagaaaggcaataaaaatggccagttcaattac
ccatgggatgtggctataggatccgatggacgaatgatagtttctgacactagaaatcat
agagtacaactctttaattcagaaggccagtttatgaataaatatggatttgaaggtcca
ttgtggaagcattttgattccccgcgtggtgtggcgtttaataatgaaggtcatattgtg
gttacagatttcaacaaccatcgattacttgttattcattctgatttccaatcagccaga
tttttgggaacagaaggtagtggaaacggtcaatttttgcgccctcagggtgtgacagtt
gatcaagaaggcaatattattgttgcagattcaagaaatcatcgaattcaggtatttcaa
cccaatggcaatttcttgtgtaagtttggcagtgcaggttcagggcctggtatgatggat
agaccgtctggtttgtgcgtcaatccagatggtttgttaatagtcattgattttggcaac
aatagaatccaggtttactga
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integrated database retrieval system
