KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_114418
Entry
LOTGIDRAFT_114418 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K10612  cullin 5
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    LOTGIDRAFT_114418
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lgi04121]
    LOTGIDRAFT_114418
   03400 DNA repair and recombination proteins [BR:lgi03400]
    LOTGIDRAFT_114418
Ubiquitin system [BR:lgi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     LOTGIDRAFT_114418
DNA repair and recombination proteins [BR:lgi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     LOTGIDRAFT_114418
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 20231090
NCBI-ProteinID: XP_009050939
JGI: 114418
UniProt: V4C903
LinkDB
Position
Unknown
AA seq 778 aa
MLGQQGQCKFEDKWPCMRPTVLKLLRQEPVSRDEWHYLFEAVHSVCMWDEKEGPPKIYKA
LEEDILDFIRNAQTRVLQHKEDSALLIRAYIAEWGKFFTQCNYLPMPFNQLEANLSGKLH
NSTQKKDQESLVRKLMLDSWNQSIFCNIKKRLQDSAMKLVHSERNGEAFDSQLVIGVRES
YVNLSSDTEDKLKIYRENFEKAYLEATESFFKMKAPRYLEENGVQNYMSFADSKLKEEEL
RARRYLETGYGCNSVAALTECCVRVLVTDFKETILQECADMIKNNETEKLRLMFSLMDRV
PDGITPMLSDLEKHIVEQGLADMMSAAQAITSDSEKYVEQLLDLFNRFSKLVKDAFLDDP
RFLTSRDKAYRTVVNDTSVFRLEIPVKNKSIAGIKTQPESKCPELLANYCDMLLRKTPLS
KKLASEEVEAKLHDVLLVLKYVQNKDVFMRYHKAHLTRRLILDTSADNEKEENMVEWLRE
VGMPADYVNKLARMFQDIKVSEDLNVEFKDIHRNNNEGIADAINIKILNAGAWARSSDRV
SVTLPRELEDYIPQVEEFYKLKHNGRKLQWHHLMSNGIITFCNDSGGKFDLEVTTFQMGV
LFAWNQRPYEKVSYESLRLATELPDAELRKTLWSLVAFPKLKQQILLCSSDIKSPKDFVD
VTVFWVNQKFTMIKNGKVQKRGKMNLVGRLQLSTEKSKEEDNEGIMQLRVLRVQEAVVKI
MKMRKRITNAALQTELVEILKNMFLPSKKLIKEQIEWLIEHKYMKRDGDNINMFIYMA
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgcttggccagcaagggcagtgtaaattcgaggacaaatggccatgtatgaggcccaca
gttctaaaattgctgagacaagaacctgttagcagagatgaatggcattatctttttgaa
gctgtccattcagtctgtatgtgggatgagaaagaaggtccaccaaaaatatacaaggct
ctcgaagaagatattttagactttattcgcaatgcccaaacaagagtactgcaacataaa
gaagattcagccttgttgattcgtgcttatattgctgaatggggtaaattttttacacag
tgcaattatttacctatgcctttcaatcaactggaagctaatttgtcaggcaaactacac
aacagtacacaaaagaaagatcaagaaagtttggttcggaagttaatgttagacagctgg
aaccaaagtattttttgtaatataaagaagagactacaagacagtgccatgaaactggtt
cattcagaaagaaatggtgaagcctttgattctcaactggttattggtgtgagagagtct
tatgtcaatttgagttcagacacagaagataagctgaaaatctatagagaaaattttgag
aaggcgtaccttgaagctactgaatctttcttcaaaatgaaggcaccacgataccttgaa
gaaaatggtgtacagaattacatgagctttgctgattcaaaactgaaggaagaagaatta
agggccagaagatacttagaaactggttatggatgtaattcagtggctgctttaactgaa
tgttgtgtaagagtgttggttactgatttcaaggaaaccattttacaagaatgtgctgat
atgataaaaaataatgagactgaaaaattaagacttatgtttagtctgatggatcgtgtg
ccagatggtatcactcctatgttatctgatctggagaaacatattgttgaacaagggtta
gctgatatgatgtctgcagctcaagccattacctcggattctgaaaaatatgttgaacaa
ttgttagatttgtttaatcgttttagtaaattagtgaaagatgctttcttggatgatcct
cgatttttaacctcccgagataaagcttacaggactgttgttaatgatacctctgtcttt
aggctggaaatacctgtcaaaaataagagtatagctgggattaaaacacaaccagaatcc
aaatgtcctgaacttttagctaattattgtgatatgcttctaaggaaaactccattaagt
aaaaagttagcctctgaggaagttgaagcgaaattacacgacgttttattagtattaaag
tatgttcagaataaagatgtttttatgagatatcataaagcccatttgacaagaagatta
atattggatacatcagctgataatgaaaaagaagaaaatatggtggaatggttgagagaa
gttggcatgcctgctgattatgtcaacaagttagctagaatgtttcaagatatcaaagtt
agtgaagatttgaatgttgagtttaaggacattcaccgaaacaataacgaaggcatagct
gatgctattaatattaagattttgaatgcaggtgcttgggctagatctagtgatcgagtt
tctgttaccttaccacgagaattagaagattacatcccacaagtggaagaattttacaag
ttaaagcacaatggacggaagttacagtggcatcatcttatgtccaatggtattataaca
ttttgtaacgatagtggtggaaaatttgatctagaagtaaccacttttcaaatgggcgtt
ttatttgcttggaaccaacgaccgtatgagaaagtctcctacgaaagtttacgtttagca
acggaattaccagatgcagaattaagaaagaccttgtggtctttggtagcgtttcccaaa
ttaaaacagcagatccttttatgcagctcagatataaaatctcctaaggactttgtagat
gtgactgttttttgggtgaaccaaaagtttactatgataaagaatggtaaagttcaaaag
cgaggaaagatgaatcttgtgggacgacttcagttatccactgaaaagagtaaagaagaa
gataatgaaggaattatgcagcttcgagtgcttcgtgttcaggaagctgttgtcaaaatc
atgaaaatgagaaagagaattaccaacgcagccttacaaactgaactagttgaaatctta
aaaaatatgtttcttccatccaagaaactaatcaaagaacaaattgagtggctaatagag
cataaatacatgaaacgtgatggtgacaatataaatatgtttatatatatggcttga

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