Lottia gigantea (owl limpet): LOTGIDRAFT_120211
Help
Entry
LOTGIDRAFT_120211 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lgi01009
]
LOTGIDRAFT_120211
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_120211
Enzymes [BR:
lgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LOTGIDRAFT_120211
Protein phosphatases and associated proteins [BR:
lgi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
LOTGIDRAFT_120211
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
Pre-60S particles
Helicases
LOTGIDRAFT_120211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CovS-like_HAMP
Motif
Other DBs
NCBI-GeneID:
20231837
NCBI-ProteinID:
XP_009056436
JGI:
120211
UniProt:
V4A7M3
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MSEGIEKKRNKDLDRKRKSSEREKNIKASEDVSFDHRPPPAKIQRTGPFISSLFKSNPDI
PKVDSSSVQTIKEEVFTSKKFGDLPLSPNMITNLEDRMNMKNMTTVQQLAIPRILQGQDA
LVKSQTGSGKTLAYAVPIVQKLQSITPKIDRSHGPYAIVVVPTRELATQSYEVFMKVCKP
FVYVVPGCLMGGEKRKAEKARIRRGINVLVGTPGRLVDHLQNTHGLSVKHVQYLVLDEAD
RLLDMGYEKDVAQIVNSLNDYGETKRQTILLSATLSEGVERLAGMSLSNPAHVSVSSDDV
DHDDNIDSGIENDKNEPKESFAVPQELKQHFVITPCKLRLVTLVAFILSKCRLNKNKSKM
IVFLSTQDSVEFHHKLISDIFCKTKKKKVKSKTDMKSLKFDLFKLHGDMAQKERNEVFKK
FSEISSGVLLCTDVAARGLDLPQVSWIVQYTTPGQTSDYIHRVGRTARVGSQGQSLLFLI
PSEVNYIKQLNDKHISLKEMQMKNILESLMTVIEYIKFPEENKRQKPRMWEEAATAVHQL
FEMYVAKHPSMTELSRRAYQSFIRAYATYPSHMKHIFSIKKVHLGHLAKSFALREAPGSI
GVVQAKKYQEDHAQDKKDNRYVISILKKF
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagggaatagaaaagaaaagaaataaagaccttgacagaaaaaggaaaagtagt
gaaagagaaaagaacataaaggcatctgaagatgtgagttttgatcaccgaccaccacct
gctaaaattcagcgcactgggccctttatatcttcactgtttaaaagtaatcctgatatc
ccgaaagttgatagttcatctgttcagacaataaaagaagaagtatttacttctaaaaag
tttggcgatttaccattgagtcctaatatgataactaacttggaagatagaatgaatatg
aagaatatgaccacagtacaacagttagctatacctagaatattacaaggtcaagatgct
ctagttaaatctcaaacaggttcaggtaaaactctggcctatgctgttcctattgttcag
aagttacaaagtatcacaccaaaaatagataggtcacatggtccttatgctatagtagtt
gttcccactagagagctagcaactcagagttatgaagtctttatgaaagtgtgtaagccc
tttgtatatgtggttcctggttgtttgatggggggagaaaaaagaaaagcagaaaaagca
agaataagaagaggtattaatgtattagttggtacaccaggaagattggttgatcatcta
cagaatacacatggtttatctgttaaacatgttcaatatttggtattggatgaggctgat
agattgttggatatgggatacgaaaaagatgtagcccagattgtaaactcattgaatgat
tatggtgaaacaaaacggcaaaccattttattatcagccacattgagtgaaggtgtagaa
agattagcaggcatgtcattatcaaatccagctcatgtatcagtttctagtgatgatgtt
gatcatgatgataacatagattcaggaatagaaaacgataaaaacgaacctaaagaaagt
tttgctgtaccacaagaattaaaacagcattttgttattacaccttgtaaattaagatta
gtaactctggttgcttttattctttctaaatgtcggttaaataaaaataaaagtaaaatg
atagtatttttatcaactcaagattcagttgaatttcatcataaattaatcagtgatata
ttctgtaaaaccaagaaaaagaaagtaaaatctaaaactgatatgaaatctttaaaattt
gatttatttaaactacatggtgatatggctcaaaaggaaagaaatgaagtctttaagaag
tttagtgaaattagttctggtgttttgttatgtacagatgttgcagctcgtggtttagat
ctaccacaagttagttggattgtacaatatactactcctggtcagacatcagactacatt
catcgtgtaggtcgtacagctagagttggttcacaaggacaatcattactatttcttata
ccatcagaggttaattatatcaaacaacttaatgataaacatataagtttaaaagaaatg
caaatgaagaacatattagaatcattaatgactgtaatagaatatatcaaatttcctgaa
gaaaacaagagacagaaacctagaatgtgggaagaagcagctactgctgtacatcagtta
tttgagatgtatgtagctaaacatcctagtatgacagaattatctagaagagcttaccaa
tcatttattagagcttatgctacctatcctagtcatatgaaacatatattctctataaag
aaggtacatctaggtcatttagctaagagtttcgctttacgtgaagcacctggttctatt
ggtgtggtacaagctaagaaatatcaggaagatcatgctcaagataagaaagacaatagg
tatgttataagtatattgaagaaattttga
DBGET
integrated database retrieval system
