Lottia gigantea (owl limpet): LOTGIDRAFT_120635
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Entry
LOTGIDRAFT_120635 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lgi00535
]
LOTGIDRAFT_120635
04091 Lectins [BR:
lgi04091
]
LOTGIDRAFT_120635
Proteoglycans [BR:
lgi00535
]
Cell surface proteoglycans
Others
LOTGIDRAFT_120635
Lectins [BR:
lgi04091
]
C-Type lectins
Others
LOTGIDRAFT_120635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
20231884
NCBI-ProteinID:
XP_009056672
JGI:
120635
UniProt:
V4BU42
LinkDB
All DBs
Position
Unknown
AA seq
2131 aa
AA seq
DB search
MCLLFLFSASFYGQSYVRVPFQLSARSNQVDLDFKTPRPHGLLLLAAGSTDYFSIELSSG
IIKVQIDLGSGEAILNSPPGLRLDDSQWHHLSINRTNGNLVLTIDEVITSSTVIPGKFSE
LNIQHGIFLGGLGTFTDAYDGTFKYFRGCLKKTFFNKYDILSTAQQMNNPVNTFEISWSC
DDEFDAGSDQAITFKSDSSFVAFPPLHIREKGTFSCDLKTRSNTSVIFFNTGRRSSGLDY
IGLELIRGKLKLSANKGSGVIDVFSDKKINNGHWHQVDVIISPGMLELRVDGQRNITRLY
SKDNKYLNLAGHLYVGGIGVKDKSNAIRRGLESLKHDRGMHSSMKGCIRNVVINSRTYGF
REVVVSRVVQPKCSFDFPCATEPCIEGSVCKELDNNEYKCLCNQNVCTKYVADVLAIDEL
RVEEGGEATLTTNVIDVIFDYQAYSIRESSVQFTVKVHPRFGSLEVNLRRRTNEDIFTLL
DLVGGKVSYAHDGTDTRSDDVTIEMKITSYDANFPKQYQGSFMFVLPIRISPVNDPPKLV
LVAGSTIQILKHTKTLFSNQIFNVDDPDSTPNKLRYMLTYINNDHGYFIRANVSKKEVTD
FTQAEINSGIIWYMHRKDNTVPIRLKVSDGSLETAEAEVMLHAVDIDISIPINSGLKMAL
GTSAFILPGNLTAAANVQGQTIDLRYRIIQKPKYGSIQRKQHENHKWVTVETFSQRHINK
HKIRYINTKKPESEYFDEFRFLVSAKESTTIENKFRITFQSVKLQLNNNKQILLASTGIG
QVTSKDLEVISNSVAVESDQIIYTVAGTQSQGQIYRVPEDDATSKDSLFRDVPPISTFTQ
KDINNGFIYFKLTKPTFTPVNNFVKLSASFQDQQVLEMRLNWKYEPEESSIRFTNNGLQG
VIEGGSKAILRDDLYLEIDGIQETKFSILSLPQFGMLILKDPRSNAVIQSNISEFTSKDI
SESKVYYKHDDSEHDKDSFSFMSIPLYIDEEEISGEIQEISGVFDIKMMMRNDNQPVREV
DRVFHVVTNKNRPLTIKDVSFSDPDIDYDASNLKYTRRGIPNGDIVDRESGAPVYQFTQQ
DLIDKKLLFQHSGAEYGRAALWVTDGQFFTNSLFEIQASPPFVKIQNNTGITVKKGSFSS
ISSHNLSLETNIFLEPSDINVVLIEEPLYGHLRIRGKKVSEFTYDDLLSSNVKFWHDGSA
NQEDKFKYAIVANEAKVQGIFPIVTYLESQLQPPRITHNKILEVSEGSGAIITQNQLNVH
HPDSIPTDIVYTVTTKPQYGAIYVKGILSDSDQTTFTQQDIIDDYVKYTNTRTGVLTDKM
VFDVSNQFQTLRNLEFFIEIVPNILVFETEEVKVKEGGRQALQPNHFKLKGRFYQGKEVV
YEIKQQPVKNEIYYEHDGSERLKDEFTVVASLSDKSKASLPHVVTVTVESVNDQAPRIIV
NSVLEVWKGSVTLLTNQSLLAEDPDSFDDDIIFRVSSPTNGHIAYLDNTFREISQFTQSE
VDKGLIVFVHEGDNLGEFNIQATDGVNNDQLQIFHIKAKPLVLTLVENNPLQVFPATLQP
ITRDVLYTTTNAKNVTKPITYTLETRPRRGKIVVLDNGVPLEVTSFTQNDVDDAKIFFKH
SGNIHHWSESDSFFFEISTTYAEPLKEELIDIQISYGNINSGNIDQFLRRSPPSVREGSE
ITIRPEHLDISLLERRLYQFGSRVSVDFMLIGQPKYGYLEKSRRRLATTDIFTQKDINQG
AIRYFHDDTDTLEDVFDIAVQIRPPDLSTTDSGIDSYDYETNFTITVTPVNDQNFKLVTT
TPSVQVIQGQSVNITSDHLMTSDPDTSPSGLVYEIRTAPKYGRLVLDKDTGKSVTSFTQK
DVDSDLVAFISDGTQEADSFFFRVSDGVHNHYYKKFNIYILPITVKVNSKESIYLVQSES
SVYISPKSLNVSTNGERSKVWYNVTKEPEYGSIYYQESQTKYFSQSDIDESLMLYIQSDL
SVGEDYFICDVYVEGVNVFLSKQRYDIRVKPLLKQGPLHAPAGSNVAITKYTLDASRLAA
VTGDNPVFDITKQPEFGRIVKLSRTKKDLYSVAPIYKPVDFFTHEDVVYTKVYYKADDSA
VDSAASDKFSFTLRAKNVQPASGNFIIDLQP
NT seq
6393 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttactctttctcttttcagcttcattctatggacagagttatgtcagagtacca
tttcaactatcagctagatccaaccaggttgatcttgacttcaaaacaccaagacctcat
ggcttattactgttggcagcaggatcaactgattacttctccattgaacttagttcagga
atcatcaaggttcagattgatctgggatcaggagaagctatccttaactctcctcctgga
ttacggctagatgattcacaatggcatcatctcagcattaacagaacaaatggcaactta
gtcctaacaattgatgaagtgatcactagctccacagttattcctggaaaattctcagaa
ttgaacatacagcatggaatctttttgggaggtcttggaacttttacagatgcttatgat
ggtactttcaaatatttccgtggctgtctgaagaaaacatttttcaataaatatgacatt
ttgtctacagcacaacaaatgaacaatccagtcaacacatttgaaatctcttggagctgt
gatgatgaatttgatgctggttcggatcaagctataactttcaagtctgactcttccttt
gttgccttcccacctttacacatacgagaaaaggggacattttcctgtgatttaaaaacc
agatcaaatacttctgtgatattttttaatactggtcgaagatcaagtgggctagattat
attggacttgagctgatccgtggtaaactaaaactgagtgccaataagggaagtggtgtc
attgacgttttctctgataaaaaaattaataatgggcattggcatcaggtggatgtcatc
atatctcctggtatgttagaacttcgagttgatggacaacgtaatattacacgtttgtac
tcaaaagacaataagtatttgaatttagcaggacatttgtatgtgggaggaataggggtt
aaggataagtctaatgctataagacgtggactggaatccctcaaacatgatcgtggtatg
catagttcaatgaaaggatgtatacgtaatgttgtgataaatagtcgtacttatggattt
cgtgaagttgttgtcagcagagtggttcaacctaaatgttcttttgacttcccatgtgca
acagaaccatgtattgagggatcagtgtgcaaagaactggacaacaatgaatataaatgc
ctatgtaaccaaaacgtgtgcacaaaatatgtggcagatgttttggcaattgatgaactg
cgtgtagaggaaggtggagaagcaacactaaccacaaatgttattgatgtgatatttgac
taccaggcctattcaattagggaatcctctgttcaatttactgttaaagttcatccaagg
tttggaagtcttgaagtgaatttgcgaaggaggacaaatgaagacattttcacattatta
gatttagttggtggtaaggtttcttatgcccatgatggaactgatacacgttcagatgat
gtaactattgaaatgaagattacttcttatgatgctaactttccaaagcagtatcaagga
tcattcatgtttgttttacccattaggatttcacctgtaaatgatccacccaagttagtg
ctggtggctggcagtacaattcaaattctgaagcatacaaaaaccttattttctaatcag
atatttaatgttgatgatcctgattcgactcccaataaattgcgctacatgctgacatac
atcaataatgatcatggatattttatacgggcaaatgtctcaaagaaagaagtgacagat
tttacccaagctgaaataaattctggaataatttggtatatgcatcgaaaagataacact
gttccaatccgcttaaaagttagtgatggctcattagaaactgcagaagcagaagttatg
cttcatgctgtggacattgatatttcaatacctataaatagtggattaaaaatggcgcta
ggaacaagtgctttcattctaccaggaaatttaactgctgctgctaatgtacaaggacaa
actatagatctcagataccgcataattcaaaagcccaaatatggaagcattcaacgaaag
caacatgaaaaccataagtgggttaccgtagaaaccttttctcaaagacatatcaataaa
cataaaatacgttacattaacactaaaaaaccagagtctgaatattttgatgaattcaga
tttttggttagtgctaaagaatcaaccacaattgagaataaatttagaattactttccag
tcagtgaaacttcaacttaacaataataaacaaatacttttggcctctacaggaattgga
caggtaacttcaaaagaccttgaagttatctccaactctgtagctgtagaaagtgatcaa
attatatatactgttgctggcacacaatcccaaggacaaatttaccgagtacctgaagat
gatgccacttctaaggacagtttgtttagggatgtaccacctatctccacctttacacag
aaagacattaacaatggctttatatattttaagcttaccaaaccaacatttacaccagtc
aataattttgtgaaactaagtgcttccttccaagatcagcaagttcttgaaatgagactt
aattggaaatatgaacctgaggaatcatccataagatttaccaataatggactccaaggt
gtcattgaaggcggttcaaaggctattctaagagatgatctttacctggaaatagatgga
attcaagaaacaaaattcagtattctgagtttaccacagtttggtatgctgattctgaaa
gatcctagatctaatgctgttattcaaagtaatatttcagaattcacttccaaagatatt
tcagagagcaaagtttattacaaacatgacgattcagagcatgacaaggactcgttttct
ttcatgtctatacctctatatatagacgaggaagagatctctggagaaattcaggaaatt
tcaggcgtttttgatatcaaaatgatgatgaggaatgataatcaaccagtgagagaagtt
gacagagtttttcatgttgtgaccaacaagaatcgaccattgaccattaaagatgtttct
ttttctgatccagacattgactatgatgcttccaacttgaaatacactcgtcgaggaata
ccaaatggtgatattgtggacagggagtctggtgctccagtttaccagttcactcaacaa
gatctaatagataaaaagttactctttcaacacagtggtgctgaatatggtagagctgct
ttatgggtaacagatggtcaattctttaccaatagtttatttgaaatacaagcttcaccg
cccttcgttaaaatacaaaataatacaggtataacagttaaaaaaggcagcttcagttca
atatcttctcacaatttgagcctggagaccaatatttttctggaaccaagtgatattaat
gtagttttaattgaagaacctctttatggtcatttgagaattcggggtaaaaaggtttca
gaattcacatatgatgatctcctttcaagcaatgtaaaattctggcatgatggcagtgca
aatcaagaagacaaatttaaatatgccatagttgccaatgaagctaaagtacaaggaatc
ttcccaatcgttacctatcttgaaagtcaacttcaaccaccaagaatcacccataataag
atcttagaggtatcagaaggcagtggagccattattactcaaaatcaactcaatgttcat
catcccgattccataccaacggatattgtctacacagtgaccaccaagccgcaatatggt
gccatttatgtcaagggtattctctctgattcagatcaaaccacattcacccaacaagac
attattgatgattatgttaaatacactaacactaggaccggagtactaaccgataaaatg
gtttttgatgtgagtaatcagttccagactctccgaaatctggaattcttcatagaaatt
gtacccaatatattggtgtttgaaacagaggaagtcaaagtgaaagaaggtggtcgtcag
gcactgcagccaaatcatttcaaattaaagggaaggttttatcagggtaaagaagtggtt
tatgagattaaacaacaacctgtgaaaaatgaaatctattatgaacatgatggtagtgaa
cggcttaaggatgagttcacagttgtggcatcattaagtgataaatcaaaagcaagtctt
ccccatgttgtgacagtaacagtagaatctgtaaatgatcaagcacctcgcatcattgtc
aattctgtgttagaagtttggaaaggatcagtaacattgctaacgaaccaaagtctcctt
gctgaagatccagattcctttgatgatgatattatattccgtgtttctagtcctactaat
ggccatattgcctacttagataatacctttcgtgagataagtcagtttacacagtcagaa
gttgacaagggtttgatcgtatttgtccatgaaggtgataatttgggagaatttaacatc
caagcaactgatggtgtaaacaatgaccaactacagatctttcatataaaagctaaacca
ctcgtattaacattagtagaaaataatccacttcaagtctttcctgctacattacaaccg
attactagagatgtactttatacaaccaccaatgccaaaaatgttacaaaaccaatcaca
tatactttagaaacaagaccaagacgtggtaaaatcgttgttcttgacaatggcgttcct
ttggaagtgacatcatttacacaaaatgatgttgatgatgctaagattttcttcaaacat
tctggaaatatacaccattggtctgaaagtgattctttcttctttgaaatctccactacg
tatgctgaacctttaaaagaagagcttatagatattcagatatcgtatggtaatatcaat
agtggaaacattgaccaatttttacgtagatcaccaccatcagttcgagaaggaagtgag
ataactattagaccagaacatttagatatatctttattagaacgcagattgtatcagttt
ggatctcgtgtttcagtggactttatgttgattggacaaccaaaatatgggtacctagag
aaatccagaaggcgtcttgcaacaacagacatatttacccaaaaagatatcaaccaggga
gcaatcagatactttcatgacgatacagatactctcgaagatgtttttgatattgctgtt
caaattcgccctccagatttatcgactacagactctggaattgatagctatgactatgag
acaaacttcactatcacggtaactcctgtaaatgatcaaaatttcaaactcgtgacaacg
actccatcagtgcaagttatccaaggacaatctgtcaatatcacttctgatcatctaatg
acatcagatccagataccagcccaagtggtttagtttacgaaataagaactgctcctaaa
tatggacgcctggttcttgataaagacactgggaaatctgttacatctttcacacaaaaa
gatgttgatagtgatttagtagcatttattagtgatggaactcaggaagcagactccttc
tttttccgtgtttctgatggtgttcacaatcattattataaaaaattcaatatctatatc
ctgcctataactgtgaaagtgaactcaaaggaatcaatctatttggttcaatcagaatct
tctgtatatatttcgccgaaatccttaaatgtctctaccaatggcgagcgtagtaaagta
tggtataatgttactaaagaaccagagtatggtagtatttattaccaagaatcacaaact
aaatatttcagtcagagtgatattgatgaaagcctgatgctgtacattcagtctgactta
tccgtgggtgaagattattttatatgtgatgtatatgtggagggtgttaatgtgtttctt
tcaaaacagcgttatgatattcgtgtaaagccattgctaaagcaaggaccattgcatgca
ccagctggttcaaatgtggcaatcactaaatatactttggatgcaagtcgtttagccgcc
gtaactggtgataatcctgtgtttgatattactaagcaaccagaatttggtcgtattgtt
aaactaagtcgcacaaaaaaagatttatattctgtggcacctatttataaacctgtagat
ttttttacccatgaggatgttgtatatactaaagtgtattataaagcagatgatagtgct
gtagatagtgccgctagtgacaaattttcttttactcttcgtgcaaaaaacgttcagcca
gcttctggcaactttattattgatctccaacct
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integrated database retrieval system