Lottia gigantea (owl limpet): LOTGIDRAFT_122513
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Entry
LOTGIDRAFT_122513 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03018
RNA degradation
lgi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOTGIDRAFT_122513
09123 Folding, sorting and degradation
03018 RNA degradation
LOTGIDRAFT_122513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_122513
03041 Spliceosome [BR:
lgi03041
]
LOTGIDRAFT_122513
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LOTGIDRAFT_122513
mRNA degradation factors
5'-3' decay
Lsm complex
LOTGIDRAFT_122513
Spliceosome [BR:
lgi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
LOTGIDRAFT_122513
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
20232115
NCBI-ProteinID:
XP_009058227
JGI:
122513
UniProt:
V4A7G7
LinkDB
All DBs
Position
Unknown
AA seq
100 aa
AA seq
DB search
EKEKKKKESILDLSKYLDKPIRVKFSGGREATGMLKGFDPLLNLVLDGTTEFLRDPDDPY
KLTEDTRQLGLVVCRGTSVVLICPADGMEAIANPFVQQDG
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
gaaaaagaaaagaagaaaaaagaaagtatattagatttatcaaagtatttagataaacca
atcagagttaaattcagtggtggtcgtgaagcgactggaatgttaaaaggatttgatcca
ttgttgaatttagtgttagatggaactacagaatttttaagagatccagatgatccttat
aaattaacagaagatactcgtcagttaggattagttgtctgtcgtggtacctccgttgtc
ttaatttgtccagctgatggtatggaagccattgcaaatccttttgttcaacaggatgga
tga
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