KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_122513
Entry
LOTGIDRAFT_122513 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03018  RNA degradation
lgi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LOTGIDRAFT_122513
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LOTGIDRAFT_122513
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_122513
   03041 Spliceosome [BR:lgi03041]
    LOTGIDRAFT_122513
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     LOTGIDRAFT_122513
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     LOTGIDRAFT_122513
Spliceosome [BR:lgi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    LOTGIDRAFT_122513
SSDB
Motif
Pfam: LSM Gemin6
Other DBs
NCBI-GeneID: 20232115
NCBI-ProteinID: XP_009058227
JGI: 122513
UniProt: V4A7G7
LinkDB
Position
Unknown
AA seq 100 aa
EKEKKKKESILDLSKYLDKPIRVKFSGGREATGMLKGFDPLLNLVLDGTTEFLRDPDDPY
KLTEDTRQLGLVVCRGTSVVLICPADGMEAIANPFVQQDG
NT seq 303 nt   +upstreamnt  +downstreamnt
gaaaaagaaaagaagaaaaaagaaagtatattagatttatcaaagtatttagataaacca
atcagagttaaattcagtggtggtcgtgaagcgactggaatgttaaaaggatttgatcca
ttgttgaatttagtgttagatggaactacagaatttttaagagatccagatgatccttat
aaattaacagaagatactcgtcagttaggattagttgtctgtcgtggtacctccgttgtc
ttaatttgtccagctgatggtatggaagccattgcaaatccttttgttcaacaggatgga
tga

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