Lottia gigantea (owl limpet): LOTGIDRAFT_122743
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Entry
LOTGIDRAFT_122743 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K06248
chondroadherin
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
LOTGIDRAFT_122743
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lgi00535
]
LOTGIDRAFT_122743
Proteoglycans [BR:
lgi00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
LOTGIDRAFT_122743
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_9
LRR_R13L1-DRL21
LRR_RPS2
LRRNT
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
20232151
NCBI-ProteinID:
XP_009058448
JGI:
122743
UniProt:
V4ABV3
LinkDB
All DBs
Position
Unknown
AA seq
327 aa
AA seq
DB search
MLKYFLLLILATYIFSTTNSEISEPCVNSGNRTVCYCTRNKTYVNCSSQGLKKIPQIKFK
YKVLDFSNNALRHLNSFMFTLFPNLQKLYIDRNCIYKIASSRIDCLKKLKYLNISELHME
IIPNNLFSKLTSLRRLYIEHTEYNGITKIPANYLSPLKKLLQLYLNDNKLSKINEGDLPK
SLEIINLAFNPLTRNDITSVPSFCNGKEPIFPNLKNLYLDKNCLFHITPENIDCLKNLES
LNISQTNMHYLPDNMFNSLTSLRTLSLEYTGFNGIKRVNPDFFAPLKKLKILYLNGNKIT
RVYENDLPENLEVLNLSYNPFICDCKL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatacttcctgttgctcattctagcaacctacatattttctacaacgaattct
gaaatctctgaaccgtgtgtgaacagtgggaacagaacagtttgttattgtaccaggaat
aaaacttatgtgaattgttcttcacaaggattaaaaaaaatcccacaaattaaattcaaa
tataaagtactagacttcagtaataatgcacttagacacttaaacagttttatgttcact
ttatttccaaatctacagaaactttatatcgacagaaattgcatatacaaaattgctagt
agcagaatagattgcctcaagaaactcaaatacctgaatatatctgaattgcacatggag
attataccaaataatctgtttagcaaattaacttcactgagaagattgtatattgaacat
actgaatacaatggaattaccaaaatcccagcgaattatttgtcaccattgaagaaactg
ctacagctctatctaaacgacaacaaactatcaaaaatcaacgagggcgaccttcctaaa
tctttagaaatcatcaatttagcctttaacccacttactcgtaatgacatcacctctgtc
ccgtcattttgcaatgggaaagaacccatttttccgaacttgaaaaatctatacctggac
aaaaattgcttatttcacatcacacctgaaaatatcgattgtttgaaaaatctagaaagt
cttaatatatcgcagacaaatatgcattacttgcccgataacatgttcaactctttaaca
tctttgagaacgttgtcattggaatataccggttttaacggaatcaagcgcgtgaatccc
gactttttcgcacctttgaaaaaactcaaaattctttatttgaatggaaacaaaatcacc
cgagtgtacgaaaacgatttgcctgaaaatttggaagttttaaacttgagttataatcca
tttatttgtgactgcaaacta
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