Lottia gigantea (owl limpet): LOTGIDRAFT_124623
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Entry
LOTGIDRAFT_124623 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_124623
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
LOTGIDRAFT_124623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Cytochrom_D1
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_LRRK2
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
WD40_like
PD40
WD40_2
YunG
Beta-prop_DCAF4
PmrD
Motif
Other DBs
NCBI-GeneID:
20232383
NCBI-ProteinID:
XP_009059575
JGI:
124623
UniProt:
V3ZF55
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
IFQREHGLDKRQQFTQGDKCVINSKFLPNKVKTVAKYHQKAFCGTYSKDGSIFLSAAQDQ
NLRVYKTDKSFKLYKSIRARDVGWSVLDTAFSPDGNYVIYSSWSDSIHLCSIHGDHDVHE
ALNLTPGEHSFCIFSLTFSSDNTEILGGANDGCLYVYDRESNQRKLKIESHDDDVNAVAF
ADDNSQILYSGGDDGILRVWDRRTLREDHPVPVGTFAGHRDGITYIDSKGDARYLLSNSK
DQTIKLWDIRSFSGNDGVEATKRAVSAQKWDYRWQQVPRKVPKNILPGDTSVMTYKGHCV
LHTLIRCHFSPEYSTGQRYVYTGCATGSVIIYDLLTGAVVKKLDKHSACVRDVSWHPYYN
KLISTSWDGTLGLWEHHSTSAEDSDSDMDNPCHCDDEDEDGERSLRPRSSGLRARFAPRS
PPRPRKPVVENTDRFKGLYD
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
attttccagagagaacatggtctagataaaagacaacaattcactcaaggagataaatgt
gttataaattccaagtttttaccaaataaagtgaagactgttgccaaatatcatcaaaaa
gctttctgtggtacctattcaaaagatggttctatatttttatctgcagcacaagatcag
aatttacgtgtttataaaacagacaaatcatttaaactttataaatctatacgagctaga
gatgttggttggagtgtattagatacagcctttagccctgatggaaattatgttatctac
tcaagttggtcagattcaattcatttatgcagtatacatggtgaccatgatgttcacgag
gccttaaatttaactccaggggaacacagtttttgtattttttctctcactttttcttcc
gataacaccgaaatattgggtggtgctaatgatggttgtttatatgtatatgatagagaa
agcaatcaaaggaaattgaagattgaaagtcatgatgatgatgtaaatgctgtagcgttt
gctgatgataattcccagatattatatagtggtggtgatgatggtatattaagggtatgg
gatcggcgaacacttagagaagatcatccagtaccagtaggaacatttgcaggacataga
gatggtataacatatatagattccaaaggtgatgcccgatatttgttatccaattctaaa
gatcagacaatcaaattatgggatattcgaagtttttcgggtaatgatggtgttgaagca
acaaaaagagcggtttctgcacaaaaatgggattacagatggcagcaagttcctagaaaa
gttccaaagaatatcttgcctggcgatacctcagtgatgacctataaaggtcattgtgtt
ttacatacattaatacgatgtcatttttcacctgaatattctacaggacaaagatatgta
tatactggttgtgctactggctctgtgataatttatgatttgttaactggtgctgttgta
aagaagttagataaacatagtgcttgtgttagagatgtgtcttggcatccttattataat
aaactcattagtacttcgtgggatggaactttaggattatgggagcatcattccacctca
gcagaagattctgattcagatatggacaatccttgtcattgtgatgatgaagatgaagat
ggtgaaagatccttgcgtcctagatcttcaggtttgcgtgctcgctttgcaccccgcagt
ccccctagacctagaaagcctgttgttgaaaacacagatcgatttaaaggcttatatgat
tga
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