KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_124623
Entry
LOTGIDRAFT_124623 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
lgi  Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lgi04121]
    LOTGIDRAFT_124623
Ubiquitin system [BR:lgi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     LOTGIDRAFT_124623
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WDR55 Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_WDR90_POC16_2nd Cytochrom_D1 Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_LRRK2 WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_WDR35_TULP_N WD40_like PD40 WD40_2 YunG Beta-prop_DCAF4 PmrD
Other DBs
NCBI-GeneID: 20232383
NCBI-ProteinID: XP_009059575
JGI: 124623
UniProt: V3ZF55
LinkDB
Position
Unknown
AA seq 440 aa
IFQREHGLDKRQQFTQGDKCVINSKFLPNKVKTVAKYHQKAFCGTYSKDGSIFLSAAQDQ
NLRVYKTDKSFKLYKSIRARDVGWSVLDTAFSPDGNYVIYSSWSDSIHLCSIHGDHDVHE
ALNLTPGEHSFCIFSLTFSSDNTEILGGANDGCLYVYDRESNQRKLKIESHDDDVNAVAF
ADDNSQILYSGGDDGILRVWDRRTLREDHPVPVGTFAGHRDGITYIDSKGDARYLLSNSK
DQTIKLWDIRSFSGNDGVEATKRAVSAQKWDYRWQQVPRKVPKNILPGDTSVMTYKGHCV
LHTLIRCHFSPEYSTGQRYVYTGCATGSVIIYDLLTGAVVKKLDKHSACVRDVSWHPYYN
KLISTSWDGTLGLWEHHSTSAEDSDSDMDNPCHCDDEDEDGERSLRPRSSGLRARFAPRS
PPRPRKPVVENTDRFKGLYD
NT seq 1323 nt   +upstreamnt  +downstreamnt
attttccagagagaacatggtctagataaaagacaacaattcactcaaggagataaatgt
gttataaattccaagtttttaccaaataaagtgaagactgttgccaaatatcatcaaaaa
gctttctgtggtacctattcaaaagatggttctatatttttatctgcagcacaagatcag
aatttacgtgtttataaaacagacaaatcatttaaactttataaatctatacgagctaga
gatgttggttggagtgtattagatacagcctttagccctgatggaaattatgttatctac
tcaagttggtcagattcaattcatttatgcagtatacatggtgaccatgatgttcacgag
gccttaaatttaactccaggggaacacagtttttgtattttttctctcactttttcttcc
gataacaccgaaatattgggtggtgctaatgatggttgtttatatgtatatgatagagaa
agcaatcaaaggaaattgaagattgaaagtcatgatgatgatgtaaatgctgtagcgttt
gctgatgataattcccagatattatatagtggtggtgatgatggtatattaagggtatgg
gatcggcgaacacttagagaagatcatccagtaccagtaggaacatttgcaggacataga
gatggtataacatatatagattccaaaggtgatgcccgatatttgttatccaattctaaa
gatcagacaatcaaattatgggatattcgaagtttttcgggtaatgatggtgttgaagca
acaaaaagagcggtttctgcacaaaaatgggattacagatggcagcaagttcctagaaaa
gttccaaagaatatcttgcctggcgatacctcagtgatgacctataaaggtcattgtgtt
ttacatacattaatacgatgtcatttttcacctgaatattctacaggacaaagatatgta
tatactggttgtgctactggctctgtgataatttatgatttgttaactggtgctgttgta
aagaagttagataaacatagtgcttgtgttagagatgtgtcttggcatccttattataat
aaactcattagtacttcgtgggatggaactttaggattatgggagcatcattccacctca
gcagaagattctgattcagatatggacaatccttgtcattgtgatgatgaagatgaagat
ggtgaaagatccttgcgtcctagatcttcaggtttgcgtgctcgctttgcaccccgcagt
ccccctagacctagaaagcctgttgttgaaaacacagatcgatttaaaggcttatatgat
tga

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