Lottia gigantea (owl limpet): LOTGIDRAFT_125375
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Entry
LOTGIDRAFT_125375 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K16478
nephrocystin-4
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lgi03037
]
LOTGIDRAFT_125375
Cilium and associated proteins [BR:
lgi03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
LOTGIDRAFT_125375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
20232485
NCBI-ProteinID:
XP_009060464
JGI:
125375
UniProt:
V4A683
LinkDB
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Position
Unknown
AA seq
1329 aa
AA seq
DB search
MFIILSELIYTVLIISFQVPGSQAEYQISVSLFDLKFKCFFGKQWIGPVVPCGQSKKINY
KQNIYFHTAYKNSNILGVIEIIVHTTDEFGKVRRLSCGWGVIRFFKHNEDIPDSSRGLPL
TLQTSAIYYGSPRALFFLEDPLEENELMRPIQDCQAHYTVCTHKALLNVLHLIPENVIVG
SQDVVPGLVDGRDAGKDKFKKPKLLNTVSVHMEHFSLHLQPYVDKFEEELCNFLKYDRSQ
RENRSIEGLQVSIAERRLQIGVHNGLCYVEKPQTVLLEEKHAPTSRKPTASPSVRRSSKF
THKRTGSTGSAGSQSTNLVLKNPVQINDISEDPLFAVILKLEYVIAEPLSENDRRMSLSY
ARAHTRTVSLRWAIWNPFLHPNQSEIHLGLIGGNKQSPDEEFIYKMPDTDMQEESVSKTA
GGLAMFLMLSVPPLSYNNQMSGLSISYNGLSPHTDAGYTGGINGSMASIRSEGGESLIYE
SGPTSNQLYAASLQVPTHAQGGIQPQLYQQTQPGMHVAPPVYNQMYMAQQAAIFQANVMA
QVGPESELREMPYRPAHTPTLTPVPLPVGGQGLSRAAYARLYTAGFKTILDKNGEPPEVI
DPLSRININLQREHADPLQTNEIVFQFLAFSKMLTFDANGPKKNSGSVFFTFQFYRFPQM
TTERLLLSEPQNELTSSSESLPFILKRLDGNTVHLTPGYEVRYYVDPTYLKPGEGFLFLQ
HLSRQILHIDVWDGDSLLQIGSCAVDLKYLCRSGNEAVQTTFELDVIKTDYPDEMSAVSD
DRTGVKAPGSHSSLQGKLHLRMANIGHALDSRTGKIDMSPLPSKSQVIVSQTAGNSKYKG
GSLSHTANVKMVKKARAHHLADNREVATLLFSDKTTMPHNDENEVTREGDAEKQRKLARM
QAIRQMSSTDKPPSSVMGYRKDKADRTRDLKTIEIYRLQTKRDGILSMLNESITTEHTIF
PSFGTTEFFEFVFRNPFNTEQTITVECSDPDLQVVTSTREWRHFKTLGQLPTQLEENMFS
KDSQSDSPQLFLRAKETVNIPLRFRSYLTDQSTQPQMPVDQLKNNKQSTFKTGDNQMEDL
MQSRVIKVYFKSEESKAVAILSLKVEPQPHVIDQTFRFYHPEQSFLKKAIRLPPFHTLPG
NPVGGNSVNKVFVRCSDDNVITDSKATQPGEPHDVFFKVAMGASPQRKRFFIAIYIDPFL
SRPIQIWQVYVHALQRVDLACVEGQTSRFNLLLKGTQASRLVRCYSSNEVEMQLSPNDQF
MLAAGAVHELNVAVRCNTVGNISYYINVVDVEYHQLVRSWLVCVNCRAPIVTRTYDLILP
VGGGKGSSK
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgtttatcattttatctgaattgatatatactgtactgattatatcatttcaggtgcca
ggttctcaggctgaatatcaaatctctgtctcattatttgatctgaaatttaaatgtttt
tttggtaaacaatggattggcccagtagttccgtgtggtcagagtaaaaagatcaactat
aaacagaatatttactttcatacagcctataagaattctaatatacttggtgtaatagag
attatagttcatactactgatgaatttggtaaagttagaagattatcgtgtggatggggt
gtgattagattctttaaacataatgaagatataccagattcatctcgcggattaccactt
acattacaaacgtctgccatctattatggatcaccaagagctttgttttttcttgaagat
cctttggaagagaatgagttgatgagaccaatacaagattgtcaggcacactatactgta
tgtacacataaagctttattaaatgtactacatttaataccagagaatgttatagttggt
tcacaagatgttgtacctggactggtagatggtagagatgctggtaaagataaatttaag
aagccaaagttactgaacacagtttcagtccatatggaacatttctcccttcatctccaa
ccttacgtagataaatttgaagaagaactatgtaattttttgaagtatgatagatcacaa
cgtgaaaatagatctattgaaggattacaagtttctatagcagaaaggagacttcagatt
ggtgtccataatggtttatgttatgtagagaaaccacaaactgttctattagaagagaaa
catgctccaacatcacgaaaacctacagcaagtccatctgttagacgtagttctaaattt
actcataaacgtactggttctaccggttcagctggaagtcaatcaactaatttagtatta
aagaatcctgtacaaattaatgatatatctgaagatccattgtttgctgttatattaaaa
ctagaatatgttatagctgaaccattatccgaaaatgatagaaggatgtcattaagttat
gctagagctcataccagaactgtatccttgagatgggccatatggaatccctttctacat
cctaaccaatctgagatacatctaggattaataggtggtaataaacagtcccctgatgaa
gagtttatctataaaatgcctgatactgatatgcaagaagaatcggtcagtaaaacagct
ggtggtctggcaatgtttcttatgttatctgtaccaccactgtcatacaacaatcaaatg
tctggtttatcaatatcatataatggattgtctccccacaccgatgctggctatactggt
ggtatcaatggttcaatggcatctattcgtagtgaaggaggagagagtttgatatatgaa
tctgggccaacatccaatcaactttatgctgcatccctacaagtaccaactcatgctcaa
ggtggaatccaacctcaactgtaccaacaaactcaacctggcatgcatgttgctccacca
gtatataatcaaatgtatatggcccaacaagcagctattttccaggccaatgtgatggct
caggtaggtcctgaaagtgaattaagagaaatgccatatagaccagctcatactcctacc
ctgacacctgtaccattacctgttggtggtcaaggtctatcaagagcagcttatgcccgt
ttgtatacagctggatttaaaactatactagataaaaatggagaaccaccagaagttata
gatccactatctcgtataaatattaatcttcaacgtgaacatgctgatcctttacagacc
aatgaaatagtcttccaattcctggctttctccaaaatgttgactttcgatgccaatggt
ccaaagaaaaattctggaagtgttttcttcacttttcaattttacagatttcctcaaatg
accactgaaaggttgttattgagtgaacctcagaatgaactaacatctagttcagaatca
ttaccgtttatattgaaacgtctagatggaaatacagttcatcttacaccaggatatgag
gtgagatattacgtggatccaacatatctaaaaccaggagaaggatttttatttttacaa
catttgtctcgtcagatattacatattgatgtttgggatggtgattctttattacaaata
ggatcttgtgctgtagatttaaagtatctatgtagaagtggaaatgaggctgttcagaca
actttcgaattggatgttataaaaacagactacccagatgagatgagtgctgttagtgat
gataggacaggagttaaggcccctggttctcactcctcattacaaggaaaattacatcta
cgtatggccaatataggtcatgctttagattccaggactggtaaaattgatatgtcacca
ttgccaagtaaatcacaagttattgtatctcaaacagctggtaatagtaaatataaaggt
ggtagtttatctcatacagctaatgttaaaatggtaaagaaagccagagcccatcattta
gctgacaatcgagaagtagccactctattattttctgacaagacaactatgcctcataat
gatgaaaatgaagtaacaagagaaggtgatgcagaaaaacagagaaaattagctagaatg
caggctattagacaaatgtcttctacagacaaacctcctagtagtgttatgggttatcgt
aaagataaagctgatagaactagagacttaaagacgatagaaatttatcgtttacaaact
aaacgagatggtattttgagtatgttaaatgaatcaattactacagaacatactatattt
ccatcttttggtactacagaattcttcgagtttgtttttcgaaatccgtttaatacagaa
cagactataacagttgaatgttcagatccagatttacaggttgtaactagtactagagaa
tggagacattttaaaacattaggacagttaccaactcaactggaagagaatatgtttagt
aaagatagtcagtctgattctccacaattatttcttcgagctaaagaaacagttaatata
ccactacgattccggtcatatcttactgatcaatctactcaacctcagatgcctgttgat
caattaaagaataataaacaatcaacatttaaaacaggagataatcaaatggaagatttg
atgcaatcacgagttatcaaggtatattttaaatcggaggaaagtaaagccgtagctatc
ctatctttgaaagttgaacctcaacctcatgtcatagatcaaacattccgtttttaccat
ccagaacaatcattcttaaagaaagccatcaggttacctccctttcatactctaccaggt
aatccagtgggaggaaatagtgttaacaaagtctttgttagatgtagtgatgataatgtt
atcactgatagcaaagctactcaacctggtgaacctcatgatgttttctttaaggttgct
atgggagcatcaccacagagaaaaagattttttattgctatctatattgaccctttccta
tcccggccaatacagatatggcaggtctacgttcatgctttacaaagagttgatttagca
tgtgttgagggacagaccagtcgctttaatcttttactcaaaggaactcaggcttcaaga
ttagtaagatgttattcatcaaatgaggtagaaatgcagttatcacccaatgatcagttt
atgttagctgctggagctgtacatgaattaaatgtagctgtaagatgtaatactgtgggt
aatatatcatactatattaacgtagtagatgtggaatatcatcagttagtaagaagctgg
ttagtttgtgttaattgtcgagctcctattgtcaccagaacctatgatctcattctaccg
gttggtggaggtaaaggttccagtaag
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