KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_126420
Entry
LOTGIDRAFT_126420 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K12876  RNA-binding protein 8A
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03013  Nucleocytoplasmic transport
lgi03015  mRNA surveillance pathway
lgi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LOTGIDRAFT_126420
  09122 Translation
   03013 Nucleocytoplasmic transport
    LOTGIDRAFT_126420
   03015 mRNA surveillance pathway
    LOTGIDRAFT_126420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_126420
   03041 Spliceosome [BR:lgi03041]
    LOTGIDRAFT_126420
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     LOTGIDRAFT_126420
Spliceosome [BR:lgi03041]
 Complex C
  Other components
   EJC/TREX
    LOTGIDRAFT_126420
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_occluded
Other DBs
NCBI-GeneID: 20232593
NCBI-ProteinID: XP_009061071
JGI: 126420
UniProt: V4A0F1
LinkDB
Position
Unknown
AA seq 160 aa
MAEVMLEVEDGDEFEVDEEGDQGLVKLKEKAKKRKGRGFGSDGPTKSGVEEYEGMDVDDA
LPVDGPGPQRSVEGWILFITGVHEEAQEDDIYDKFTEYGEIKNLHLNLDRRTGFLKGYAL
VEYETFKEAQSAMDALNGSEILAQKINVDWAFVRGPRNTK
NT seq 483 nt   +upstreamnt  +downstreamnt
atggcggaggtaatgcttgaggttgaagatggtgatgaatttgaagttgatgaagaagga
gatcagggtttggtgaaactgaaagaaaaagcaaagaaaagaaaaggcagagggtttggt
tcagatggaccaacaaaaagtggcgtggaagaatatgaaggaatggatgttgatgatgct
ttaccagttgatggtccgggtccacaaagatctgtagaaggttggatcttatttataact
ggtgtacatgaagaggcacaagaagatgatatttatgataaattcacagaatatggtgaa
attaaaaatttacacttaaatttagacagacgaactggttttctcaagggttatgcattg
gttgaatatgaaacatttaaagaggcacagtcagctatggatgctttaaatggtagtgaa
atattggcacagaaaattaatgtggattgggcgttcgtcagaggaccaagaaatactaag
taa

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