Lottia gigantea (owl limpet): LOTGIDRAFT_127906
Help
Entry
LOTGIDRAFT_127906 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04120
Ubiquitin mediated proteolysis
lgi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LOTGIDRAFT_127906
04120 Ubiquitin mediated proteolysis
LOTGIDRAFT_127906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lgi03110
]
LOTGIDRAFT_127906
04131 Membrane trafficking [BR:
lgi04131
]
LOTGIDRAFT_127906
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_127906
Enzymes [BR:
lgi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
LOTGIDRAFT_127906
Chaperones and folding catalysts [BR:
lgi03110
]
Other chaperones and cochaperones
Others
LOTGIDRAFT_127906
Membrane trafficking [BR:
lgi04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
LOTGIDRAFT_127906
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
U-box type E3
LOTGIDRAFT_127906
Multi subunit type E3
STUB1-CHIC2 complex
LOTGIDRAFT_127906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_1
CHIP_TPR_N
TPR_2
TPR_11
TPR_16
ANAPC3
TPR_12
TPR_7
TPR_BSK1_C
TPR_8
TPR_19
TPR_17
TPR_14
NRBF2_MIT
ARM_TT21_C
TPR_9
zf-NOSIP
DUF7017
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
20232773
NCBI-ProteinID:
XP_009061920
JGI:
127906
UniProt:
V3ZXV9
LinkDB
All DBs
Position
Unknown
AA seq
270 aa
AA seq
DB search
MSAVDLKNQGNKLFAARKYDDAISCYTKAIAKNPNTATFFTNRALCYLKQRQWDFASKDC
HRALDLDRLLVKGHFFLGQSLVEQGLYDEAIASLKKAFDLAKDQKLNFGDDITGALRLAK
KKRWNKLEDKRIQQEICLQSYINKLIREDAERFLPEDIYYLAWQAIFYFLTKKKITELNR
LFSEVDERRRKRDVPDVLCGKISFEVMRDPVITPSGITYNKQDIIEHLQRVGHFDPVTRS
ALTQEQLIPNLAMKEVIDNFLEDNAWAEDY
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgttgacttaaaaaaccagggaaataagttgtttgctgcgagaaagtacgac
gatgctatatcatgctacacgaaagctatcgctaaaaacccaaacacagcaacattcttc
accaacagagcattgtgttacctcaaacaaagacagtgggattttgctagtaaagactgt
catagagccttagatttagacagacttttagttaaaggacatttttttctaggacaatct
ttggttgaacaaggattgtatgatgaagctattgccagtcttaagaaagcctttgatctt
gctaaagatcaaaaattgaattttggagatgatataacaggagccttgagacttgcaaaa
aagaaaaggtggaataaactagaagataaaagaattcagcaagaaatttgtttacagtct
tatatcaataaattaataagggaggatgcagaaaggtttctgccagaggacatatattac
cttgcctggcaagctatcttttactttttaaccaaaaaaaagataacagaattaaacaga
ttatttagtgaggttgatgagagaagacggaaaagagatgtaccagatgttttatgtggt
aaaataagttttgaagtaatgagagatccagtaataactccaagtggtataacctataat
aaacaagacattatagaacatttacagcgtgttggtcattttgatccagtaacaagaagt
gcattaacacaagaacaattaattcctaatctagctatgaaagaagtgatagataatttt
ctagaggataatgcctgggcagaggattattaa
DBGET
integrated database retrieval system
