Lottia gigantea (owl limpet): LOTGIDRAFT_128850
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Entry
LOTGIDRAFT_128850 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_128850
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
90S particles
Other 90S particles
LOTGIDRAFT_128850
Pre-60S particles
Other pre-60S particles
LOTGIDRAFT_128850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
FemAB
Motif
Other DBs
NCBI-GeneID:
20232889
NCBI-ProteinID:
XP_009062778
JGI:
128850
UniProt:
V3Z6V3
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MRGRRFNNKDKPNKSGKWRKGQSSSSNPVTKKFREAAKNRIFHKNTGPSSLTVAALAKHN
ADDGDPETQSIVSTEDARSVTAKTFSTWATNWTDCTNATFSRVHRYWSSNSAMHKEILAV
LAAVTEVIKQQGGTESETEYFAALMTALESAESRESLAAIAYLLNLAIKKVPAAVLKSRF
SQVSKQLLDYLAKYSDGASTSLTKSLLLCLAAVLRVQDQGVWNYGSTHQIYNSILTFITH
KKPRIRKTCHQAVKIILKGSLFMLNDDNPPYHPASSLTAKYCNTEIEQCAGSSDVVNTLY
TLGLLKEIMGTFSHNSLKSTCENILRVMTINNQLVKAGGMQALHGMFSSFPKSTNLPGEL
NAQIITALYDYQPSEHDSQPMRAWLAVMEKAHVNLVRNDEKLGVSHLPKLFSISMTCLLS
NKPEVVSSAANTLKILLLDCVAPTLDYQQVLVESAPKGSTTPIHKIVTVCQSGLSYQFLS
AWKNVFHLLGVLYEVSYGKSFLDFFALMLITLIELRETPNCSYKGEIDQVLGCAIRGMGP
RIVLDNVPLNITGEEDDHHFPRSWMLPILNNNIQNTELSFFSSYFLPLAAKCRQNCLRLR
SEKSFALATAYDALQKQFWSLLQGFCKNPTDLPTAFKSVAKILGTAISERDDLKIEVMGA
LRKLININLENETNKAELAKFAKNFLPILFNLFTSDPKKEKESCRLSALATIKCYLQITD
EKLAESFFDTCMSKINDEDITQSRKLALTDLVAAILPYVQQDRLQLIFDMAKPNLKSTDH
QLQKKSYRILEEICSMKSDTSKIFVQENLSKIQKILTGALSKSSPSSKTPRLRCLTHIVQ
NLEKKQMNFIMTLLPEAILCTKEIGGRARTAAYTLLISIGNAMIRWRKEKTESVIYEYIK
LILAGLAGTPEMVSGSLFALTRIFYQYKDKVGSECLDDLVENVCLLMTSKSREIVQSSLA
FIKVMLSAYKDTTLAGQLKTLVNGLVSMKEDCKHHFHLKNKQIYTKLIKRFGYEVIFKLT
PDDVHKVLANIRKRLEREKRNQIADSDDDDDSDDEEVTKNKPETIDELLRDTDSELDEDD
NEKKTESCKKKKGKKTFIQEEGTDIVDFLDPSANKKILCNRNDNERNKKREELFKRGGDG
RLVITTEQDDTGEKLESDMEDDLEELMASIDGRKKKSRKRTFEDIDDSDDNDDVIDNKKY
KAGGKGIHRSLESTGKDKSGFGVEYKAKKAGGDVKKKGKPDPYAYVPLDYKRLNKRKQAK
LKGQFKGFVKGAKKGAVKGQKQRKR
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtaggagatttaataacaaagataaacccaataaaagtgggaaatggaggaaa
ggtcagagctcgagcagtaatcctgtaacgaaaaagtttagagaggcggctaaaaataga
atatttcataaaaatacaggtccaagcagtttgactgttgcagctctagcgaaacacaat
gctgatgatggtgatccagaaacgcagtctattgtttctactgaagatgccaggagtgtt
acagctaaaacatttagtacatgggccaccaattggacagattgtacaaatgcaactttt
agtagagttcataggtattggtcatctaactcggcaatgcataaagaaatattagcagta
ttagcagctgttacagaagtcatcaaacaacaaggtggtacagaatcagaaacagaatat
tttgctgctttgatgacagctttagaaagtgctgaatcaagagaatccttagctgccatt
gcttatttattaaatttagctattaagaaagttcctgcagctgttttaaagagtcgtttt
tctcaagtatcaaaacaattactagattatttagccaaatattctgatggagcctctaca
tctctaacaaaatctttgttgttatgtctggctgctgtgttaagagtacaagatcaaggt
gtatggaattatggttcaacacatcaaatatacaacagtatcttgacattcataacccat
aaaaaacctaggataagaaagacatgccatcaagctgtaaagataatattaaaaggaagt
ttatttatgttaaatgatgacaatccaccctaccacccagcttcatcattaacagctaaa
tattgtaatacagaaatagaacaatgtgcaggttcaagtgatgttgttaatactctctat
acacttggtttattaaaagaaataatgggtacattctctcataatagtttaaagtccaca
tgtgaaaatatactgagagtcatgactataaataatcagctagtaaaggctggaggtatg
caagcattacatggtatgttttcatcttttcctaaatctacaaatttacctggtgaatta
aacgctcagatcatcactgcgttatatgattatcagccatcagaacatgatagtcaacct
atgagagcttggttagctgttatggagaaagctcatgttaatttagtaagaaatgatgag
aaattaggagtcagtcacctaccaaagttattttctattagcatgacttgtttattatca
aataaaccagaagttgtcagttcagcagctaatacattaaagatactactgttagattgt
gttgcacctactcttgattaccaacaagttttagtagaatctgctccaaaaggttccact
acaccaatacataaaatagttacagtttgtcaaagtgggctaagttaccagtttttatca
gcctggaagaatgtctttcatctgttaggtgttttatatgaggtaagttatggtaaatct
tttcttgatttctttgcactgatgttaattacactaatagaattgagagaaacacccaac
tgttcatataaaggtgaaatagaccaagttttaggctgtgctataagaggtatggggcct
agaattgtactggataacgtacctctgaatattactggagaagaagatgatcaccacttt
ccacgaagttggatgttacctattttaaataacaacatacagaatacagagttatctttc
ttctcatcatatttcttaccattagcagcaaaatgtcgacaaaactgcttacggttgcga
tcagagaagagttttgctctggcaacagcttatgatgccttacagaaacaattctggtct
ttattacaaggtttctgtaaaaaccctacagatttacccacagcatttaaatcagtagcc
aagatattaggtacagcaatatcagaacgagatgatctaaaaatagaagtaatgggagct
ttaagaaaattaatcaacataaatctagaaaatgaaacaaataaagcagagttagccaag
tttgctaagaatttcctaccgatattgtttaatttattcacatcggatcctaagaaagag
aaagagagttgtagactatcagctctagctactatcaaatgttatttacaaataactgat
gaaaagttagcagagtcattctttgatacatgtatgagtaaaataaatgatgaagacatt
acacaaagtagaaaattggccctgactgatttagtggcagccatattaccctatgttcaa
caagataggttacagttgatttttgatatggctaaacctaatttaaagtcaaccgatcat
cagttacagaagaaatcttacagaatcctagaagaaatttgttcaatgaaatcagataca
agtaaaatatttgtacaagaaaacttgagtaaaatacagaaaatattaactggagcttta
tccaaatctagtccttcatctaaaactccaagattaagatgtttaacacatattgtacag
aatttggagaaaaaacagatgaattttatcatgacactgttaccagaggctatattatgt
actaaagaaataggggggcgtgctagaacagcagcctacacattattaatatcaataggt
aatgccatgatcagatggagaaaggaaaaaacagaatcagtaatatatgaatatataaag
ttgatattagctggtctggctggtacacctgaaatggtcagtggttcattgtttgcttta
accagaatcttttatcaatataaagataaagttggatctgagtgtctggatgacctagta
gaaaatgtgtgtttattaatgacatctaaatcaagagagatcgtccagtcttcattagct
tttattaaagtgatgttatcagcatacaaagataccacattagctggccagttaaaaacg
ttggtgaatggtcttgtctcaatgaaagaagattgtaaacatcattttcatttgaagaat
aaacaaatttataccaaattaatcaagagatttggatatgaagtaatctttaaattgaca
ccagatgatgttcataaggttttagctaatatacggaaaagattggagcgagaaaaacga
aatcaaattgctgattcagatgatgatgatgattctgatgatgaagaagtcacaaaaaac
aaaccagaaacgatagatgaactattacgtgatactgattcagaattagatgaagatgac
aatgagaaaaagacagaaagctgtaagaaaaagaaaggaaaaaagacatttattcaggag
gaaggaacagatattgttgatttcttagatccatctgctaataaaaaaatattgtgtaat
agaaatgataatgaaagaaataagaaacgtgaagaattatttaaacgtggtggagatgga
agattagttattacgactgaacaagatgatacaggagagaaattagaatctgatatggaa
gacgatctagaagaactaatggcttctattgatggacgaaaaaagaaaagtcgtaagaga
acgtttgaagatatagatgattctgatgataatgatgatgttatagataataaaaaatat
aaagctggtggtaaaggtattcatagatcactagaaagtactggcaaagataaatcagga
tttggtgtagaatataaagcaaagaaagcaggtggtgatgtcaagaagaaaggcaaacca
gatccttatgcttacgtcccactcgattacaaaagattaaataaaaggaagcaagccaag
ttaaagggacagtttaaaggatttgtaaaaggagctaagaaaggtgcagtgaagggacaa
aagcaaagaaaacgatga
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