Lottia gigantea (owl limpet): LOTGIDRAFT_130809
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Entry
LOTGIDRAFT_130809 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lgi01002
]
LOTGIDRAFT_130809
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_130809
Enzymes [BR:
lgi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
LOTGIDRAFT_130809
Peptidases and inhibitors [BR:
lgi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
LOTGIDRAFT_130809
Ubiquitin system [BR:
lgi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
LOTGIDRAFT_130809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Usp-48
Ubiquitin_2
N6_N4_Mtase
Motif
Other DBs
NCBI-GeneID:
20233116
NCBI-ProteinID:
XP_009064111
JGI:
130809
UniProt:
V4B8S2
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MPPKLQLDKEAWKWADTTQPDNVTDDNVATAYRIPVKPCLQGTCKRNCKGNPFCLNGIGE
KQWLGELDLRKYTDFDPEVERREKNSYVGLKNLGATCYVNTFLQLWFHNSAVRQAIFKWR
DSDSTDVVDENWTPSSICGQLQLIFSLLRYSEKRFIDPTWFINHLGLDTGLQQDAQEFCK
LFLNLLESAMCQTVELNIIQEQFRGQYFYVITCKNCGGESKTSSMFYELDLNIQGQKTLQ
QALDNFLQEEVLEGENRYLCRYCQEKQDATRAIRLDTIPPVLNLQILRFIFDKKTGHKKK
LNSFLQFPDTLDMSKYLHTDKPVVYQLQAVLIHSGPSAYSGHYTAHILSDDKTAWYRFND
ENIHKMMGKKLQLGTEDEADLLGKEQKIPKTSKGFHSSKNAYMLVYSRQDSEHKDEYNLL
PSAVQDYIQKDNEKFNSWISEILNSRDCNIENGKAKQSEIQTIYKSLLINDGRQQIDNME
WINSEWLSKWLSNPNDVLPIDNSILLCPHQKLDPDMICKVKCININGGQQLYNLYNGGPR
LKGQEVLCKACVVRRCQVIQLKLKMAADDQKISSLMKNINKSEKLYWIGKSSLRSWKRLA
LSQLESEERVPNGNSNGTGNGATSPENNDDDVNDQMEPSFSFNTDLLCDNHGNLSCDENT
RKMIPEDVWKILYGYFPQSKQYTLDHPVCPQCQAINLEKSEIKLLKKKRIEEQKNELCDL
YFDRRRPSLEDQSLSQLYIVSKIFTTEWRKYIKDNGRTLPITCINNQILLCEHNKFLYSA
QELYHQSNVVLLYPNEWKILCSYMSCDVDINIIRYKEDSDTNLTTITIPGVCETCQQVRL
QAEKDEKYNFRNTVIYVYKEVVTQGQVSVDNLSINTLANGTGTQDKNLNEVDDNNIEPPD
KMQKIDPDEISRRKSQRRRKVRGEKEINVSSSMTLKELKIKIMNIFSVPPFDQTLILDGE
ILNDNTATLQQLKIYPACNILVKVDEPSEDHSVIEDILTGLYIICHTFVINFSLQYRGAQ
MTQ
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaaagcttcaactggataaagaagcctggaaatgggctgatacaactcaacct
gataatgtgacagatgataatgtagctactgcctacaggataccagtcaaaccttgttta
caaggtacctgcaaaagaaattgtaaaggaaatccattctgtttgaatggtattggtgaa
aaacagtggctaggtgaacttgatttaaggaaatacactgatttcgatcctgaagttgag
agacgagaaaagaattcctatgtaggtttgaagaatctaggagctacatgttatgttaat
acattccttcaactatggtttcataatagtgctgttagacaagctatatttaaatggaga
gatagtgattctacagatgttgtagatgaaaactggactccatcaagtatatgtggacaa
cttcaactgatattttccttgttaagatatagtgaaaaacggtttattgatcctacatgg
tttatcaatcatttaggattagatacaggcctacaacaggatgctcaagaattttgtaaa
ttatttttaaaccttttagagagtgctatgtgtcaaaccgtggaattgaatattattcaa
gaacagtttcgtggacaatatttttatgttattacgtgtaagaattgtggtggggaatct
aaaactagttctatgttttatgaattagatttaaatatacaaggacaaaagacattacaa
caagctttagacaatttcttacaggaagaagtgctagaaggagagaataggtatttgtgt
cgatattgtcaagaaaaacaagatgctacgagagctatacgtctagataccataccaccg
gtattaaaccttcagatattacgatttatatttgataaaaagactggacataagaagaaa
ctaaatagttttctacaatttcctgatactctagatatgagtaaatatttacacacagat
aaacctgtagtatatcaattacaagctgttctgatacacagtggacccagtgcttatagt
gggcattatacagctcatatactgtcagatgataagacagcctggtatagatttaatgat
gaaaatattcataaaatgatgggcaagaaattacagcttggtacagaggatgaagccgat
ttattgggaaaggaacagaaaattccgaaaaccagtaaaggattccattcgtctaagaat
gcttatatgttagtttatagtcggcaagacagtgaacataaagatgaatataatttatta
ccatcagctgttcaagattacattcagaaagataatgaaaaatttaatagttggatatct
gaaatcttgaattctagggattgtaatatagaaaatggtaaagctaaacaaagtgaaata
cagacaatctataagtcattattaataaatgatggaagacaacaaatagacaatatggaa
tggataaatagtgaatggttatctaaatggttaagtaaccccaatgatgtcttaccaata
gacaactcaatcttattatgtcctcatcaaaaattagaccctgatatgatatgtaaagta
aaatgtatcaatattaatggtggtcaacaactgtataatttatataatggtggacccaga
ttaaaaggtcaggaagtattatgtaaagcatgtgttgtcaggcgttgtcaagtgatacaa
ttaaaactcaaaatggctgctgatgatcagaaaatttcatctttaatgaaaaatataaat
aagagtgagaaattgtattggattggtaagtcatcgttgagaagttggaagagattagca
ttgtcacaattagagagtgaagaaagagtgcctaatggtaatagtaatggtaccggtaat
ggtgctacaagtcctgaaaataatgatgatgatgtcaatgatcaaatggaacctagtttt
agttttaatacagatttattatgtgataatcatggaaatttaagctgtgatgaaaatact
cgtaaaatgattcctgaagatgtgtggaagattttatatggttactttcctcaatctaaa
cagtatactttagaccaccctgtttgtccacaatgccaggcaattaatttagaaaagagt
gaaattaaattattaaagaagaaacgtatagaagaacagaaaaatgaattatgtgattta
tattttgatcgacgtagacctagtctagaggatcagtctttatcacaactgtatattgtt
agtaaaatatttactaccgagtggaggaaatacatcaaagataatggtagaactttacct
attacatgtatcaacaatcaaatattactatgtgaacacaacaaatttctttactcagca
caagaattatatcatcaatccaatgtagtgttattatatcccaatgaatggaaaatacta
tgtagttatatgagttgtgatgttgatattaatattataagatataaagaagatagtgat
accaatcttactacaatcactataccaggtgtttgtgagacctgtcaacaggtgaggcta
caggctgagaaagatgagaagtataattttcgaaatactgtgatatatgtttataaggag
gtagtgactcagggtcaagttagtgttgataatctgtccatcaacacactagcaaatggt
actggtacacaagacaaaaatttgaatgaggtggatgacaataatattgaacctccagac
aagatgcagaagatagacccagatgagatctccagaagaaaaagtcagcgtcgaagaaaa
gttcgaggtgaaaaagaaatcaatgtatcatcttccatgacacttaaagaacttaaaatt
aagattatgaatatattctcagtacctccatttgatcaaacattaatattagatggtgaa
atccttaatgataatacagctacattacaacagttaaaaatttatcctgcctgtaatata
ctagtaaaggttgatgaaccaagtgaagatcattcagtcatagaagatattttaacaggt
ttgtatattatttgtcacacctttgtcatcaatttttctcttcagtataggggtgcacag
atgactcagtga
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integrated database retrieval system
