Lottia gigantea (owl limpet): LOTGIDRAFT_132355
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Entry
LOTGIDRAFT_132355 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOTGIDRAFT_132355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_132355
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
LOTGIDRAFT_132355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
20233307
NCBI-ProteinID:
XP_009064982
JGI:
132355
UniProt:
V3ZJH2
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
RSPEVVRKNKELKKNRKILSSDSSDDSERGCDVWIEIYLQEENQWICVDCIREVVNKPYD
IESTATYPLHYCLAYSNDGSIKDVTPRFASDWLSTTRKLRTDSDWWRETLQTYRSQEEQN
EQDDEHIKDQLIKRPLPTSIGQFKSHPLYVLQRHLLKFEAIYPDTAIPVGYIRGEPIYAR
ECVHVLHSRENWMKEGRAVRIGEEPYKMVKSRPKWKKPKENPDALDLEIFGEWQTDIYIP
PPAVNGKIPRNEYGNVELFKPWMLPGGTVHLQVQGLNRIAKKLGIDCVAAMVGWDYHGGF
SHALLEGFVVCEDQKDILMAAWDEDQEIQKQREMEKIEKRVLGNWKLLTRGLLIKERLQI
KFDLKVGIYTALYVGV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
cgaagtccagaagttgtgagaaagaataaagaattaaagaagaataggaaaatattatcg
agtgattccagtgatgactctgagcgtggttgtgacgtctggattgaaatttacttacag
gaagaaaatcaatggatctgtgttgattgtatacgagaagttgtaaataaaccatatgat
atagaatcaactgctacttatcctttacattattgtctagcttatagtaatgatggtagt
ataaaggatgtgacgccacgctttgcgtctgattggttgtctacaactcgtaaattacgt
actgattctgattggtggagagaaacactacagacttatcgtagccaggaggagcaaaat
gaacaagatgatgaacatattaaagatcaattgattaaaagacctctaccaaccagtata
ggtcagtttaaaagtcatccattgtatgtgttacaaagacatctattaaagtttgaagct
atatatcctgatacagctatacctgttggttatattagaggggaaccaatctacgctagg
gagtgtgtccatgtgttacattctagagaaaattggatgaaagaaggtagagcagtaaga
attggtgaagaaccttataaaatggtcaaatcaagacctaaatggaaaaaacccaaggag
aaccctgatgcgttagatttagagatatttggggaatggcagactgatatatatattcct
ccaccagctgtaaatggtaaaattcctcgtaatgaatatggaaatgtggaactatttaaa
ccttggatgttaccaggtggtacagtacatcttcaagttcaagggttgaacagaatagct
aagaagttaggaatagattgtgtggctgccatggtgggctgggactatcatggtggattt
tctcatgcactactagaagggtttgtggtgtgtgaagaccagaaagatattttaatggcc
gcttgggatgaagatcaagagatacagaaacaaagagaaatggagaaaatagagaagcga
gtgttaggaaactggaaattattgacaagaggtttgttgattaaagaaaggctacagata
aagtttgacttgaaggtaggaatatacactgctctgtacgtaggggtgtaa
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