Lottia gigantea (owl limpet): LOTGIDRAFT_133654
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Entry
LOTGIDRAFT_133654 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LOTGIDRAFT_133654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_133654
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
LOTGIDRAFT_133654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
20233463
NCBI-ProteinID:
XP_009066011
JGI:
133654
UniProt:
V4B495
LinkDB
All DBs
Position
Unknown
AA seq
224 aa
AA seq
DB search
MDRNPRANAGWPKGKQVFTSKMSSGVPLTIERTINLYPLTNYTFGTKEPLYEKDSSVPAR
FQRMRDDFEKIGMRRSVEGVLIVHEHSLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKR
LLTETLGRQDGGPMEWVVEDTIGNWWRPNFEPPQYPYTPAHITKPKEHKRLFLVQLPEKA
LFAVPRNYKLVAAPLFELYDNSAGYGPIISSLPQTLSRFNFLYN
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaatccacgagcaaatgcaggttggccaaaaggaaagcaagtattcacttct
aaaatgtcttcgggagttccattaactattgaaaggacaatcaacttatatccattaacc
aactacacgtttggaaccaaggaacccttgtacgaaaaggacagttcggtaccagcaaga
ttccaacgcatgcgagatgattttgaaaaaattggaatgcgtcggtctgtagaaggagtt
ttgatagtgcatgaacattctttacctcatgttttgctcctacaacttggtaccactttc
ttcaagttacccggcggtgaattaaatccaggggaggatgaagttgaaggcttgaaacga
cttttgacagagactttgggaagacaagatggcggaccaatggaatgggttgttgaggac
accataggaaactggtggaggccaaattttgagccccctcaatatccatatacaccagct
cacatcactaaacctaaagaacacaagagacttttcttagtgcagttacctgagaaggcg
ttattcgcagttcctagaaattataagcttgtggctgcacccctgtttgaactttatgac
aattctgcaggatatggacctatcatttctagtttaccacagaccctgagcagatttaac
tttttatataactaa
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