Lottia gigantea (owl limpet): LOTGIDRAFT_134230
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Entry
LOTGIDRAFT_134230 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOTGIDRAFT_134230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgi03041
]
LOTGIDRAFT_134230
Spliceosome [BR:
lgi03041
]
Common components
Common spliceosomal components
SR proteins
LOTGIDRAFT_134230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_3
RRM_5
RRM_occluded
SET_assoc
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
20233529
NCBI-ProteinID:
XP_009066376
JGI:
134230
UniProt:
V4B3Q2
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
MGTRIYIGKLSHHARERDVDRFFRSYGRIRDIQLKNGYGFIEFEDYRDADDAVYELNGKD
LCGERIYLEIARGARGRGDGGYRGGGRVLKSLFDAFIHYYSLCFNRYGPPTRTDNRIIVE
NLSSRVSWQDLKDYMRQAGEVTYADAHKKHKNEGVVEFASYTDMKTALDKLDGTEINGRK
IKMIYDGPKKRSRSRSRSRGRHSRSLSRSRSRSRSRSRSKSRSRSGSRNGKRDSRSKSPA
RKSRSRSRSRSDSRSKSRSPAAAGSAAKHDD
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgggtactagaatttacattggcaagttatctcatcatgctagagaaagggatgtcgat
cgattcttcagaagttatggtagaatcagagatattcagttgaaaaatggctatggattt
attgaatttgaagattatcgagatgctgatgatgctgtttatgaactaaatggtaaagat
ttatgtggggaaaggatatatctagaaatagcaagaggagccaggggacgtggagatggt
ggatatagagggggcggtagagtcttaaaatccttatttgatgcattcattcattattat
tctctttgctttaacagatatggtccaccaacacgtactgataatagaattattgtggag
aatttatcgtctcgtgtcagctggcaggatttgaaggactacatgagacaagctggagaa
gtgacttatgctgatgctcataagaaacataaaaatgaaggtgttgtggagtttgcttca
tatactgatatgaagacagcgttagataaactagatggtactgaaataaatggtagaaaa
ataaagatgatctatgatggacccaagaaaagaagtcgaagtcgatcgcgatcaagaggg
cgccacagtagatctctaagtcgcagcagatctagaagccgtagcaggagtcgtagtaaa
tctaggagtagaagtggcagtcgaaatggaaaacgggattcaagatctaagagtcccgct
cgtaaatctagatcaagatcaaggtcacgttctgattctcgttcgaaatcaagatcgcct
gcagcagctggtagtgcagcaaaacatgatgattaa
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