KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_135304
Entry
LOTGIDRAFT_135304 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    LOTGIDRAFT_135304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lgi03021]
    LOTGIDRAFT_135304
   03036 Chromosome and associated proteins [BR:lgi03036]
    LOTGIDRAFT_135304
Transcription machinery [BR:lgi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     LOTGIDRAFT_135304
   Coactivators
    SAGA/TFTC/STAGA complex
     LOTGIDRAFT_135304
Chromosome and associated proteins [BR:lgi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     LOTGIDRAFT_135304
    STAGA complex
     LOTGIDRAFT_135304
    TFTC complex
     LOTGIDRAFT_135304
    SAGA complex
     LOTGIDRAFT_135304
    SLIK complex
     LOTGIDRAFT_135304
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 TFIID_NTD2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_EML WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_TEP1_C NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_SPT8 PEP5_VPS11_N WD40_RFWD3 WD40_like Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F VPS8_N Beta-prop_WDR35_TULP_N Cytochrom_D1 WD_LRWD1 Beta-prop_WDR11_2nd WDR54
Other DBs
NCBI-GeneID: 20233664
NCBI-ProteinID: XP_009067209
JGI: 135304
UniProt: V3YVN1
LinkDB
Position
Unknown
AA seq 592 aa
SYFSDDDPTLYGDIYEDLKAFVDSSLDVHRVELAMVLYPVFVHMYFELVYNEHESTAKSF
MEKFSKDQEEYYQNDISKLATVTKPEHMKGNQLMENFKASKFVIRMSRDSYTHLKRHLQE
KQLNLLLNIIQEHLFIDVFDGVPRNKQQINLTCGGILGEAQRESNKTKVFYGLLKEPDIN
VPLEEDDEQTEGEQTDKPKKKKSKKDPLLMKKSKNDPNAPLISRIPLPELKDQDKIEKIT
MLRESSKRVKVDKNHPPSICFYTFLNSTHGVTSINFSEDTSLVSAGFADSVIRVYTTSPN
KLRSVKSGLELELIDKDADDVFERMMDDKTSRDMKKLNGHSGPVYSTSFSPDRSSMVSCS
EDGTIRLWSLQTWSNLVCFKGHNYSVWDVQFSPHGHYFVSGGHDRTARLWSTDHYQPMRI
FSGHLSDVDCVQFHPNSNYIATGSSDRTVRLWDVLSGQSVRIFTGHKAPIHSLCFSPDGK
YLVSSGVDQIINMWELATGSLVAQMKGHTNTVYSLAFSRDGAILSSGGLDNTVRTWDINK
IYEDIDTDVDASIPIDGSNLLLGTYHTKASPVLALQFTRKNLLLAGGAFVVC
NT seq 1779 nt   +upstreamnt  +downstreamnt
tcttatttcagtgatgatgacccaaccttatatggtgatatttatgaagatttaaaggca
tttgtagattctagtttggatgttcatagggttgaattagctatggttttgtatcctgta
ttcgttcacatgtattttgaattggtttataatgaacatgaatcaacagccaaatcattt
atggagaaattttctaaagatcaagaagaatattatcagaatgatatcagtaaattagca
actgtcacaaaaccagaacatatgaaaggcaatcaacttatggaaaatttcaaagccagt
aaatttgtcatcagaatgtctcgtgattcttacactcatcttaaacgacatttacaagaa
aaacaactgaatctattattgaatattatacaagaacatctatttattgatgtgtttgat
ggtgtgccaagaaataagcagcaaataaatctaacatgtggtggaatattaggagaagcc
cagagagaatccaataaaactaaggtattctatgggttattaaaagaaccagatataaat
gttccactggaagaagatgatgaacagacagaaggagaacaaacagataaacccaagaaa
aagaaatctaaaaaagatccactgttaatgaagaaatctaaaaatgaccccaatgcacca
ttgatatcaaggataccattacccgaacttaaagatcaagataaaatagaaaaaattact
atgttacgtgaaagctcaaagagagtaaaagttgataaaaatcatccaccttctatttgt
ttttataccttcctgaattcaacacatggagtaacttctatcaatttttctgaagatact
agtctagtcagtgctggatttgctgatagtgttattcgagtttatactacttcacctaac
aaattacgttctgttaaatctggattagagttagaacttattgataaagatgctgatgat
gtatttgagagaatgatggatgataagactagtagagatatgaagaaattaaatggacat
agtggacctgtttattctacaagtttcagtccagatagatcctcaatggtatcttgttca
gaagacggcacaattagattatggagcctacagacatggagtaatcttgtgtgctttaaa
ggacacaattattctgtctgggatgtccaatttagtcctcatggtcattattttgtatct
ggtggtcatgatagaacagctaggctctggtcaacagaccactatcaacctatgagaata
ttttctggccatttatcagatgtagattgtgtacagttccatcctaattctaactatata
gctactggttctagtgatcgcactgttagattatgggatgttcttagtggtcagtcagtc
agaatctttactggacataaggctcctatacatagcttatgtttctcaccagacggcaaa
tacttagtctcctcaggtgtagatcagattattaatatgtgggaactagcaacaggaagt
ttggtagctcagatgaaaggacatactaacactgtatatagtttggctttcagtcgagat
ggtgctatattatcctctggaggattagataatactgtaagaacatgggatattaataag
atatatgaagatatagatactgatgtagatgctagtatacctattgatggatccaatctg
ttactaggtacttatcatactaaagctagtccagtattagctttacaatttactcgtaaa
aacttactcttagctggtggagcttttgttgtatgttga

DBGET integrated database retrieval system