KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_135458
Entry
LOTGIDRAFT_135458 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    LOTGIDRAFT_135458
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lgi03021]
    LOTGIDRAFT_135458
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_135458
Transcription machinery [BR:lgi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     LOTGIDRAFT_135458
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     LOTGIDRAFT_135458
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_2 Torus zf-CCCH_3 zf-CCHC zf-CCCH_4 zf-CCHC_3 zf-C3H1 Nab2-like_zf-CCCH_
Other DBs
NCBI-GeneID: 20233678
NCBI-ProteinID: XP_009067303
JGI: 135458
UniProt: V4B1B4
LinkDB
Position
Unknown
AA seq 280 aa
MQEVVAPTVHLSFDIEYALEQQIGAQVLPFPGMDKSGAGTCTFYLVSGCNKGTACPFRHV
RGDRTVVCKHWLRGLCKKGDDCEFLHEYDMTKMPECYFFSKFGQCSNKECPFLHIDPEKK
IKDCPWYDRGFCRHGPNCKNRHQRRVLCISYVNGFCLDGANCKFVHPKFDLPVTDNSQQV
KKGNLTCHFCGEYGHKAIHCNKMPNQMRNLLSSENITRAQSRRCQRRTRMAQISLLRPLD
QVTCYKCGEKGHYANKCNKGHLAFLSQNAQNVAMMQPVNT
NT seq 843 nt   +upstreamnt  +downstreamnt
atgcaggaggtagttgcccccacagtccatctttcatttgatatcgaatatgccctggaa
cagcagataggggctcaagtgttgccctttcctggaatggacaaatctggtgcaggcact
tgtacgttttatttagtaagtggttgtaataagggtacagcgtgtccattccgtcatgta
agaggtgacagaacagttgtttgtaaacattggttacgtggtttgtgtaaaaagggagat
gactgtgaatttttacatgaatatgacatgaccaagatgcctgagtgttatttcttctca
aaatttggtcagtgtagtaataaagaatgtccatttcttcacattgatcctgagaagaaa
ataaaagattgtccatggtatgatcgaggtttttgccgacatgggcctaactgtaaaaac
agacatcaaagaagagtactatgtatatcttatgtcaatggtttctgtttagatggtgct
aattgtaaatttgttcaccccaaatttgatcttcctgtaacagacaactctcaacaagtg
aagaaaggaaatctaacttgtcatttctgtggtgaatatggacataaagctatacattgt
aataaaatgcctaaccaaatgaggaatctgctctcatcagagaacataacacgtgcccag
tcccgccgttgccaacgtcgaactcgcatggcccagatcagtctgttaagacctttagat
caagttacatgctataagtgtggagagaagggtcattatgctaataaatgtaacaaaggt
catttagctttcctcagtcagaatgcacagaatgtggccatgatgcaaccagtgaataca
taa

DBGET integrated database retrieval system