Lottia gigantea (owl limpet): LOTGIDRAFT_135458
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Entry
LOTGIDRAFT_135458 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LOTGIDRAFT_135458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgi03021
]
LOTGIDRAFT_135458
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_135458
Transcription machinery [BR:
lgi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
LOTGIDRAFT_135458
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
LOTGIDRAFT_135458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCHC_3
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
20233678
NCBI-ProteinID:
XP_009067303
JGI:
135458
UniProt:
V4B1B4
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MQEVVAPTVHLSFDIEYALEQQIGAQVLPFPGMDKSGAGTCTFYLVSGCNKGTACPFRHV
RGDRTVVCKHWLRGLCKKGDDCEFLHEYDMTKMPECYFFSKFGQCSNKECPFLHIDPEKK
IKDCPWYDRGFCRHGPNCKNRHQRRVLCISYVNGFCLDGANCKFVHPKFDLPVTDNSQQV
KKGNLTCHFCGEYGHKAIHCNKMPNQMRNLLSSENITRAQSRRCQRRTRMAQISLLRPLD
QVTCYKCGEKGHYANKCNKGHLAFLSQNAQNVAMMQPVNT
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggtagttgcccccacagtccatctttcatttgatatcgaatatgccctggaa
cagcagataggggctcaagtgttgccctttcctggaatggacaaatctggtgcaggcact
tgtacgttttatttagtaagtggttgtaataagggtacagcgtgtccattccgtcatgta
agaggtgacagaacagttgtttgtaaacattggttacgtggtttgtgtaaaaagggagat
gactgtgaatttttacatgaatatgacatgaccaagatgcctgagtgttatttcttctca
aaatttggtcagtgtagtaataaagaatgtccatttcttcacattgatcctgagaagaaa
ataaaagattgtccatggtatgatcgaggtttttgccgacatgggcctaactgtaaaaac
agacatcaaagaagagtactatgtatatcttatgtcaatggtttctgtttagatggtgct
aattgtaaatttgttcaccccaaatttgatcttcctgtaacagacaactctcaacaagtg
aagaaaggaaatctaacttgtcatttctgtggtgaatatggacataaagctatacattgt
aataaaatgcctaaccaaatgaggaatctgctctcatcagagaacataacacgtgcccag
tcccgccgttgccaacgtcgaactcgcatggcccagatcagtctgttaagacctttagat
caagttacatgctataagtgtggagagaagggtcattatgctaataaatgtaacaaaggt
catttagctttcctcagtcagaatgcacagaatgtggccatgatgcaaccagtgaataca
taa
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integrated database retrieval system