Lottia gigantea (owl limpet): LOTGIDRAFT_136701
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Entry
LOTGIDRAFT_136701 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
LOTGIDRAFT_136701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_136701
Enzymes [BR:
lgi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
LOTGIDRAFT_136701
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
HECT type E3
LOTGIDRAFT_136701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
Arm
WWE_1
HEAT_2
WWE_5
Motif
Other DBs
NCBI-GeneID:
20233831
NCBI-ProteinID:
XP_009045126
JGI:
136701
UniProt:
V4CP36
LinkDB
All DBs
Position
Unknown
AA seq
1609 aa
AA seq
DB search
MGRLQALLEARGLPSQLFGALGPRMHQFLHRTMSGGTMSKVQQLLQGLQATGDEGQQLTA
VMEMCQLLVMGNEDSLAGFPVKQVVPALISLLHLEHNFDIMNHACRALTYMMEALPRSSA
VVVEAIPVFLEKLQVIQCMDVAEQALTALEMISRRHSKAVLQAGGIAACLMFIDFFSITA
QRSALAVVANCLQSLTCDDFHFLRDSLPLLSSRLNHQDKKSVESVCSGFSRVVENFQNDQ
RLLKEIAVHGLLTNLQQLLVASPPIVNSATFVMVVRMMAIMCGNCPDLAVILLKQSIADT
LCHLLVGPQDENSTQIELVSRTPQELFEIVCLIGELLPKLPADGVFRIDSLLGRNAGFSV
DTIAWQWQDDRNIWHSYTPIDSRIIEDAYNAAEDEISLTTVGRTYTVDFKSMQQINEDSG
TARPVQRKIHSSGQPQQRGSDCSLDCCDSREEFLKEDHQLASNFIQSLFAVLYEVYSSSP
GPTVRHKCLQTILRMVYFAAGDLLKDVLITQPVSSHIAGMMASPDLKVVVGALQLAEILM
QKLPDIFSIYFRREGVMHQIKRLSELKVVVPKTPTEKEPGGASFFNAGPSGGASASKHSK
SAVRVKEDTSTASNTSSDDHGPASSHMFFRLGDVLKRKHTPKRPRKGSKPEDPSERKHSS
DNSDSKLSGATPKMSFLPSLRSWSRLSNSSHCERMSVSKESESHKFVRCSENNKEKIRSW
IKEEATKFLENNTTTESWSNSHPSVQILGKLCDAAEALTVENDNGLEPLQQIATITRESD
ISPFEIIHSGLVKKLLQYLTKSNGAINRNARIQRFLHVFLSCPPPDVIYIKDMPGELDGP
PPLAVLINKLLGCLHQLEQFQIRVHDLPGAGGMSGRGSNALKFFSTHQLKCNLQRHPSAT
NLRQWKGGPVKIDPLALVQAIERYLVIRGIGKVKDGEEDISDDGNSDEDFEDTMSAVCIS
QGTVQHKLEFLIGERPLSYEMTVYEAIKQFSHPSDRESDSESEAPIGNAKIWAQTHTIWY
RAYSDKEDTLNEGPKKKGDHTKPKTSKKSEDSHKHKMEHKARTQSLVSSYLTDQLPVYLT
VQDTSLEVISLLRVIHAINIHWSTFYEISFFPKPILPISDFISSKLTAKANRQLQDPLVI
MTGNLPKWLGELGSFSSFLFPFDTRQLLFFVTTFDRDRAMMKLQQDSGGDNSQNDNERVA
PRLDRKRRMVNRNDLLKQAEQIIDELDKSKALLEIQYENEVGTGLGPTQEFYCLVSRELQ
RADLDLWRGEVIDMTSHADPDTKIQLMHSPCGLFPAPLPKSVKASYLQKIKSKFRFLGKY
LARSLMDSRMLDIRFSQVFFKWCLGQEESLTSADLIYIDPVLARSHKQLEAIVHQKKQIV
ADKSHTDESRQLALDSLTMDGCSIDDLNLYFVLPGYFQVELKKGGKDSQVSLDNLEEYLQ
LLVQWNLVDGVSRQFHAFREGFESLVSLNSLQCFYPAELEQLFCGNINEIWDMKMLIECC
RPDHGYTQDSQAVKFLFEILSDYNSKEQRDFIQFVTGSPCLPVGGFRSLNPPLTIVRKTF
ESTENPDNYLPSVMTCVNYLKLPDYSTKDIMHEKIKFAAQEGQLSFHLS
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atgggaagacttcaagctcttttggaagcaagaggtttgccatcacagttatttggagca
ctaggcccacgaatgcatcaattcttacatagaacaatgagtggtggtacaatgagtaaa
gttcagcaacttctacaaggattacaagcaacaggggatgaaggtcaacagttaacagct
gtcatggaaatgtgtcagctcttggtcatgggaaatgaagatagcttagctggatttcca
gtaaagcaagtagttcctgcattgattagccttcttcacttggagcacaattttgacata
atgaatcatgcttgtcgtgcgttaacctacatgatggaagcactcccaagatcttcagct
gtggttgtagaagcaattccagtattcttagaaaagcttcaagttattcagtgtatggat
gtagctgaacaagctttaacagcattagaaatgatatcaagacgtcatagtaaagctgta
ctacaggctggaggaatagctgcttgtttgatgttcatagactttttcagtatcacagct
caaagaagtgcattagctgtagtagcaaattgtcttcagagtcttacttgtgatgatttc
cattttctaagagactcactcccactattaagttccagattaaatcaccaagataaaaaa
tcagtagaaagtgtctgcagtggattttcaagagttgttgaaaatttccagaatgatcaa
cgtttgctgaaagaaatagctgtacacggtttactcaccaatcttcaacaactattagtt
gccagtccacctattgtcaattcagcaacatttgttatggtagtacgtatgatggcaatt
atgtgcggaaactgcccagaccttgcagttattcttttgaaacagagcatagcagataca
ttatgtcacttgctggtcggtcctcaagatgaaaacagtacacagattgaactagtatcc
agaactccacaggaactttttgaaatagtttgccttattggagaacttctacctaaacta
cctgcagatggtgtatttcgaattgattcccttcttggtagaaatgctggatttagtgtt
gatactatagcatggcaatggcaagatgatagaaatatatggcactcttatacacccatt
gatagcagaatcattgaagatgcttacaatgctgcagaagatgaaataagtttaacaaca
gttggaaggacatacactgtggattttaaatccatgcaacagataaatgaagattccgga
acagctcgtccagttcagagaaagattcattcttcaggacaaccacaacaacgtggatct
gactgttcacttgattgctgtgactccagagaagaatttcttaaagaagatcaccagctt
gcatcaaattttatccagtctttatttgcagtactgtatgaggtctacagctcctcacct
ggtcctacagttagacacaaatgtctacagacaattctaagaatggtctattttgctgcg
ggtgatctccttaaagatgtgctgataacccaaccagtttcaagtcacattgctggaatg
atggcttctccagatttgaaagttgtagttggtgctttacaattagctgaaattttaatg
cagaaattaccagacattttcagcatctacttcagaagggaaggtgtcatgcaccaaata
aaaagactctctgaattaaaagttgtagtccccaaaacaccaacagaaaaagaacctggt
ggagcatcattttttaatgctggaccatcaggtggtgcctctgcttcaaagcatagcaaa
tctgcagtaagagttaaagaagatacatctacagcttctaatacatcttctgatgatcat
ggacctgcatcgtcacacatgttcttcaggttgggggatgtcttgaaaagaaaacacact
cccaaacgtccaaggaaaggaagtaaacctgaagatccatcagagagaaagcattcctct
gacaactcagattcaaaattaagtggtgctacccctaaaatgtctttcctgcccagccta
agaagttggagtagattgagtaattccagccattgtgaaagaatgtcagtctccaaggaa
tctgaatcccacaagtttgtcagatgttctgagaacaacaaggagaaaattagatcttgg
attaaagaggaggcaacaaaattccttgaaaacaacaccaccacagaatcctggagcaat
agtcatccttctgtacagattcttggtaaattatgtgatgctgcagaggctcttacagtt
gaaaatgataatggattagaacctcttcaacagatagcaactataacacgagaaagcgac
atatcaccatttgagattatccacagcggactggttaagaaacttttacaatatctaacg
aaatcaaatggtgcaataaacagaaacgcccgaattcaacgctttttgcatgtcttcctg
tcttgcccccctcctgatgtgatctacattaaagatatgccaggggaattagatggtcca
ccacccttggctgtcttaataaacaaattattgggttgtcttcatcagttggagcagttt
cagattcgtgtccacgacttacctggggcaggaggcatgagtggaagaggatcaaatgcc
ttgaaatttttcagcactcatcaacttaaatgtaatctacaacgacatccttcagcaacc
aatctcagacagtggaagggtggtcccgtgaagattgatcctctagctctagttcaagct
atagaaaggtatttggttattcgtggaattggaaaggtaaaggacggtgaagaagatatc
agtgatgatggaaattcagatgaagactttgaagacaccatgtcagctgtgtgcatcagt
caaggaacagttcaacataaattggagttcttgattggagagagacctttgtcatatgaa
atgacagtttatgaagccattaagcagtttagtcatccaagtgatagagaatcagattct
gaatcagaagcacccattggtaatgctaaaatctgggctcaaactcacaccatttggtac
agagcttacagtgacaaggaagatactcttaatgagggtcccaaaaagaaaggagaccac
accaaaccaaaaacaagcaaaaagtcagaagactctcacaaacataagatggaacataaa
gcaagaacacaatctcttgtgagctcatacttaactgatcagttacctgtatatttgact
gtgcaagatacctcattggaagtaatatcattacttagagtgatccatgctattaatata
cattggtcaaccttttatgaaatttcatttttcccaaaacctattctaccaatctcagac
ttcatcagcagtaaactgactgccaaagccaatcgccaacttcaagaccctttggtcatt
atgactggaaatctgccgaaatggctgggagaattgggatctttctcatccttcctcttc
ccattcgacaccagacagttgttgttctttgtcacaacctttgatcgtgatcgagccatg
atgaaactacaacaagatagtggtggagataatagtcagaatgacaatgaacgagtagca
ccaagattggacagaaagagaagaatggttaatagaaatgatctcttgaaacaagctgaa
cagatcatagatgaacttgacaagtctaaagctttgttggagattcagtatgaaaatgaa
gtaggaactggattgggtccaactcaagaattttactgcttagtctcacgagaattacaa
cgagctgatttagatttgtggagaggagaagttattgatatgaccagtcatgctgatcca
gatacgaaaattcagttgatgcattcaccttgtggccttttccctgctccgttacccaaa
tctgtgaaagcctcctaccttcagaaaatcaaatcaaaattcagatttttggggaagtat
ttagccagatctttaatggattctagaatgttagatattagattcagccaggtcttcttt
aaatggtgcttaggacaggaggagagcttgacctcagctgatctcatctacattgatcct
gttttggctcggtcacataaacaactggaggccattgttcatcagaaaaaacaaatcgta
gccgacaagtctcatacagatgaaagtcgacaactagctttagatagtctaaccatggat
ggctgtagtattgatgatcttaacctttattttgtattacctggatatttccaagtcgaa
ttgaaaaaaggtgggaaagacagtcaagtttctttggataatctagaagaataccttcaa
ctacttgtacaatggaatttagttgatggtgtttcacgtcagttccatgcattccgcgag
ggatttgaatctttagtatcattaaattcattacaatgtttttatcctgctgaacttgaa
cagttgttctgtggtaatatcaatgaaatttgggatatgaaaatgttaattgaatgttgt
agaccagatcatggttacactcaggatagtcaagcagtgaagtttttgttcgaaattctc
agtgattataattctaaggaacagagagactttattcagtttgtgactggttctccatgt
ttaccagttggtgggttccgcagtcttaatccaccattaacaattgtacgcaaaaccttt
gaatcaacagaaaatccagataactatttaccatcagtaatgacctgtgtgaattattta
aaacttcctgattattcaacaaaagacataatgcacgaaaagataaaatttgctgctcaa
gaaggacagctttcgtttcatttgtcttaa
DBGET
integrated database retrieval system