KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_136939
Entry
LOTGIDRAFT_136939 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
lgi  Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lgi04121]
    LOTGIDRAFT_136939
   03400 DNA repair and recombination proteins [BR:lgi03400]
    LOTGIDRAFT_136939
Enzymes [BR:lgi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     LOTGIDRAFT_136939
Ubiquitin system [BR:lgi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    LOTGIDRAFT_136939
DNA repair and recombination proteins [BR:lgi03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    LOTGIDRAFT_136939
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4 zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 DEAD ResIII zf-RING_5 zf-Nse RING_XB3-XBAT31 Prok-RING_4 zf-rbx1 zf-ANAPC11 U-box zf-RING_11 zf-RING_6
Other DBs
NCBI-GeneID: 20233859
NCBI-ProteinID: XP_009045587
JGI: 136939
UniProt: V4CMX1
LinkDB
Position
Unknown
AA seq 968 aa
MIGSSQDVSSNDVMFGSIRGDVVGIQHYKGTVNNGEMVTLQREPQNVYDKNAIRVVNMDS
QQVGHIKRELAKPLAFILDNKLARVEGVVPSGKNNAYKIPIEITLWGDVEKKNEALSVLR
SHGFTPRDNSVGASSSQASGSQPGLDYSHVVSNRVFLSPSEVRNEMDKLFDTLEEGDKTT
MTEPTQAIRTPLYPHQKQALNWMICKENNEALPPFWEKRGQRYYNSLTVYTTSHRPSTVH
GGILADDMGLGKTLEVISLILTNFHDGQPLAVPVAGRNRFGQQSKSKTKTKTKASTSASE
TNQSDWDKFDQCLANPENYIEDSDEEEERKAAETLRIFQSKVPKFVIKPFGSSSESDSKS
ELKKQSRSVVNDANDDIKSARPRNKSGKRMVIESDEDSNSAPCINLTSHSAKHNDMVATD
NRQVRTAADILTKSNKPRTTLIVCPLSVMNNWLSQLEEHVREDVELEIYTYYGNGRTTDS
KLLESQDIVISTYGTISADFKGRNPLRKVHWLRIILDEGHYIRNSHTLMAKAITDLKADR
KWVLTGTPIQNSIKDLYSLVNFLNISPLTESSWWKRTIERPIAQGHESAIKRVRALVANI
GLRRTKNQQVNGKPLVELPARNVFIETIKFSDEERQVYNDMQTEGKLIISRYFQQGTLLH
HYSQVLVILLRLRQLCCHPLLCSKAALDGGNNVLDDEMKKKLISALLAVLNSGSDEECPI
CLDSLKHPVITPCAHVYCRTCIENVIQQNNTMMAPCPMCRGEIKVDKLIEIPENQLQEPE
TPVVTDENWQSSSKVDALMKAVVQQRIDDPTVKSIIVSQFTSLLTLIEVPLRLNGFKFAR
LDGKMTNKKRVDNIEMFMDPSPDSPTIFLLSLKAGGVGLNLTAASRVFLMDPAWNPAAEE
QCFDRCHRLGQKRDVNITKFLVEDSVEERMLALQEKKRALMTGAFSKKQSADERRADRIN
EIKTLLEL
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgattggttcatcacaagatgtatcgtccaatgatgtgatgtttggcagtatccgtggc
gatgttgttggaattcaacattataaaggaacagtgaataatggagaaatggtcacatta
cagagagaaccacagaatgtgtacgataagaatgctattagagttgtaaacatggatagt
caacaagttggtcatattaaacgagaactggccaaacccctggcttttatactggataat
aagctagcacgagttgaaggagtcgttcctagtggtaagaataatgcatataaaatacca
atagagataacattgtggggagacgttgagaagaagaatgaggcgttgtctgttttacga
tcccacggttttactccacgagataattctgttggtgcctcgtccagtcaagcctcaggc
agtcagccaggtctagattacagtcatgttgtatccaacagagtttttctctcaccaagt
gaggttcgaaatgaaatggataaactatttgatactttagaagaaggagataaaaccacc
atgactgaacctacacaggctataagaacaccgctatacccccatcagaaacaggcgtta
aactggatgatatgtaaggagaataatgaagcgttaccaccgttctgggagaaacgagga
cagcgttattacaatagtttaacagtatatactacttctcatagaccatctacagttcac
ggaggtattttagcagacgacatgggactcggaaaaactctggaagttatctcccttatt
ttaaccaattttcatgatggtcagccattggctgtaccagttgcaggtagaaatcgtttt
ggccaacagtcaaaatcaaaaaccaaaactaaaactaaggccagtacgtcagcatcagaa
accaaccaatcagactgggataaattcgaccaatgtctcgctaacccagaaaattatatc
gaagattccgacgaggaagaagaacgaaaggcagcagaaactctgagaatatttcaaagt
aaagttccgaaatttgtcattaaaccatttggttccagttcagaatctgactcaaaatct
gagttgaagaaacagtcgcgaagtgtcgttaacgatgctaatgatgatattaaaagtgct
agacccagaaataaatcaggaaaaaggatggtgatcgaaagtgatgaagattctaatagt
gctccatgtataaacttaacatcacatagtgctaaacataatgacatggttgctactgac
aacagacaagttcggacggctgccgacattttaaccaaatcaaacaaaccacgaacaact
cttatagtctgtccactgtctgttatgaacaactggctgagtcaattagaagaacatgta
agagaagatgtagaattagaaatttatacatactacggtaatggtcgtactactgatagt
aaattattagagagtcaagatattgttatttctacttatggtactatatctgctgatttt
aagggtagaaatccattacgtaaagttcactggttaagaataattctcgatgaaggacat
tatatcagaaattcccacacgttgatggccaaggctataacagatttgaaagctgacaga
aaatgggttttgacaggaacacctattcagaattccatcaaagatttatattcactggtt
aatttcctgaatatcagtcccctgacggaatcatcatggtggaaacgaactattgaacgt
cctatagctcagggacatgagtcagctatcaaacgtgttcgagcgttggtggcgaatatt
ggactgagacgaacgaagaatcaacaagttaacggtaaaccattggttgaactaccagct
agaaatgtatttatagaaacaatcaaattctcggatgaagaacgacaagtttataatgat
atgcagactgagggaaaacttattattagcagatattttcaacaggggacattactccat
cattacagccaagttttagttattttattacgacttcgtcaactctgttgtcatccatta
ttatgttctaaagctgcgttagatggaggtaataacgtattagatgatgaaatgaagaag
aaattaatctctgctctgttagcggtgttaaattctggttctgatgaggagtgtccgatt
tgtttagacagtctaaaacaccctgttataacgccctgtgctcatgtttattgtcgtacc
tgtattgaaaacgtcatacaacaaaataacacgatgatggcaccatgtccgatgtgtcga
ggagaaataaaagtagacaagttgatagaaattcctgaaaatcaactgcaggaaccagag
acacccgtagttactgatgaaaactggcaatccagtagcaaggttgacgcgttaatgaaa
gctgtagttcaacaacgtattgatgaccctactgttaaaagtatcatagtttcacagttt
acatctctactgactcttattgaggtaccattgagattaaatggttttaagtttgctcga
ctagatggtaaaatgactaacaagaagagagttgataatatagagatgtttatggaccca
tcacccgactctcctaccatatttctactgtcactgaaggctggaggagttggacttaat
cttacggcagccagtcgcgtctttcttatggatcctgcgtggaatccagcagcagaagaa
cagtgttttgatcgctgtcatagattaggacaaaaacgtgatgttaacattacaaagttc
ctggtagaagactcagtagaagaaagaatgttggcactacaggagaaaaaacgagccttg
atgactggagcattcagtaaaaaacaatcagctgatgaacgtcgagcagacagaattaat
gaaattaaaacattgttagaattgtag

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