Lottia gigantea (owl limpet): LOTGIDRAFT_137136
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Entry
LOTGIDRAFT_137136 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04120
Ubiquitin mediated proteolysis
lgi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
LOTGIDRAFT_137136
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
LOTGIDRAFT_137136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgi04131
]
LOTGIDRAFT_137136
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_137136
03029 Mitochondrial biogenesis [BR:
lgi03029
]
LOTGIDRAFT_137136
Enzymes [BR:
lgi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
LOTGIDRAFT_137136
Membrane trafficking [BR:
lgi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
LOTGIDRAFT_137136
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
HECT type E3
LOTGIDRAFT_137136
Mitochondrial biogenesis [BR:
lgi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
LOTGIDRAFT_137136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
20233878
NCBI-ProteinID:
XP_009045711
JGI:
137136
UniProt:
V4B0J2
LinkDB
All DBs
Position
Unknown
AA seq
920 aa
AA seq
DB search
GDQTNTRLLRIKVVEGVNLARKDIFGASDPYVRISLYKGDREDGLIDIKQTKTIKKSLNP
KWEEEFIFRVNPRDNKVIFEVFDSNRVTRDDFLGLVEINLQHTYVLAEIAGREIPTKSFV
LRPRSTRSRVRGHLTLYLGYLPTESAGTDEVTPAQPSTEPGWEMVDMNNALNETGASGPV
PNDRRSSVREEQLQPLPPGWEQREDAQGRTYYVNHNQRRTQWERPRIQSVNTKPCYQIVV
HSIQEEWVLQSRYKYNVCNSFSLCRCCMPKFNINHTKDQHNYFEAVHSCTVKLVLNGQCL
CLLTEDCPNSLLSIIKEVISHSKSTVAVLTCKLACLYWVFCKNKSVYFVHSDNALPEGWE
ERQDANERTYYVNHITRKTKWIRPTFCLIFNFMIYIDTNRTQQVSDQELQQQRSLELAEM
YAHRRHVSQEDTLSVDSTTDLSASRTPTRTHSVSTPSSSSEDPRKHRPSSIHASSCTTSP
IHRPSSNEDLATKLGPLPSGWEERVHADGRVFYIDHNTHQTQWEDPRLKKLGGPAVPYSR
DYKRKYDYFRSKLRRPVNAPNKIDIKVTRKNVFEESYRYVMNIKDTEHLKTRLWIEFDGE
TGLDYGGVAREWFYLLSKEMFNPYYGLFEYSATDNYTLQINPLSWMANEEHLSFFEFIGR
VAGMAIYHGKLLDGFFIRPFYKMMLRKPITLRDMESVDSEYYNSLIWIQDNDPEDLELHF
SVEEDQFGEIQEFELKANGANIRVTNENKLEYIKEVIKYRFVSRVESQMKSLMKGFNTII
PQNLIQIFDENELELLMCGLQDIDVNDWKSHTLYKGEYNPNHPTVIHFWRVVYSFHNEMR
ARLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEKWGKTAQLPRAHTCFNRIDLPPYDSYQ
EVRSKLVLALENTQGFYDVD
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
ggtgaccaaaccaacacccgtttgctcaggatcaaagttgttgaaggtgtcaatctcgca
agaaaggatatatttggggcaagtgatccgtatgtaagaatatcattatataaaggtgat
agagaagatggacttattgatatcaaacaaactaaaacaataaaaaagagtttaaatcca
aaatgggaggaagaatttatttttagggtcaatccgcgtgataataaagttatatttgaa
gtctttgactccaatagagtgactagagatgattttctgggattggtggaaattaactta
caacatacatatgttctggcagaaatagcaggaagagaaataccaaccaaaagttttgtt
cttcgacctcgaagcaccaggtcaagagttcgaggtcatctcacactatatttaggttat
ttacctactgaatctgctggcacagatgaagttacaccagctcagccttcaacagagcct
ggttgggaaatggttgatatgaacaatgctttgaatgaaactggtgcatctggtcctgta
cctaatgatagaagaagttcagtaagagaagaacagctacaacctctgcctccaggatgg
gaacaacgagaagatgctcagggcagaacatactatgtcaaccacaatcaaagaagaaca
caatgggaacgacccagaatacagtctgtgaacacaaagccatgctatcaaatcgttgta
cactcaatacaagaagagtgggtattgcagtcaaggtataagtacaatgtttgtaatagc
ttctcattgtgtagatgttgcatgccaaaatttaatattaatcatacaaaagatcaacac
aattattttgaagcggtacattcttgtacagtcaaacttgtactaaacggtcaatgttta
tgtttgcttacagaggactgcccaaatagtttattgtccatcatcaaagaagttatatca
cattcaaaaagtactgtggcagttttgacttgcaagttagcgtgtttatattgggtattt
tgcaaaaataaatccgtgtattttgtacacagtgacaatgctttaccagagggttgggaa
gaacggcaagatgctaacgaaagaacttattatgttaatcatataacacgaaaaacaaaa
tggattagacctactttttgtctaatttttaattttatgatatacattgataccaacagg
acacaacaagtatctgatcaagaattacaacaacaaagaagtctagaattagctgagatg
tatgcacatagacgtcatgttagtcaggaagatacgttaagtgttgattcaaccacagac
ttatctgcttcacggacacctacacgaacacatagtgtttcaacacctagttcttcatct
gaagatccacgaaaacacagaccatcatctattcatgcttcctcttgcacaacttcacca
attcacagaccatcatctaatgaagatcttgccacaaagttgggcccattgccgtctgga
tgggaagaaagagtacatgcagatggtcgtgtcttttatattgatcacaatacacatcaa
acccagtgggaagatcctagattaaagaaattaggtggtccagctgttccatattctaga
gactacaaaagaaaatatgattattttagatccaaattacgccgaccagtcaacgcacca
aataaaattgatattaaagttactaggaagaatgtatttgaagagtcttatagatatgtt
atgaatattaaagatacagagcatttaaaaacaaggttatggatagaatttgatggtgaa
acaggtttagattatggtggtgtagctagagaatggttttatttattatctaaagaaatg
ttcaatccttattatggtctgtttgaatattcagccacagacaattatacattacaaatc
aacccattatcctggatggccaatgaagaacatttatcattttttgaatttattggtcgt
gttgctggtatggccatttatcacggcaaattattagatggcttctttattcgtccattc
tataagatgatgttaagaaaacctataacattacgtgatatggaatctgtggattctgaa
tattataattcattaatatggatacaagataacgaccctgaagatttagaactccatttt
tctgtagaggaagatcagtttggagagattcaagaatttgaattaaaagcaaatggagcc
aatattagagttacaaatgaaaataaattagaatatataaaagaagttattaagtataga
tttgtgtctcgtgttgagtctcagatgaaatcattaatgaaaggttttaataccatcatt
ccacagaatttgatacaaatatttgatgaaaatgaattggagttattgatgtgtggatta
caagatatagatgttaatgattggaaatcacataccttatataaaggagaatataatcct
aatcacccaacagtcatacatttctggagggttgtatattcattccacaatgaaatgaga
gccagattgttacagtttgtcactggtacctctcgtgttcctatgaatggttttgctgaa
ttatatggtagtaatggtccacagttatttactatagaaaaatggggcaaaacagctcaa
ttacctcgtgctcatacatgttttaacagaatagatctaccaccctatgattcttatcaa
gaagttcggtcaaaattagttttagctctagagaatacacaaggtttttatgatgtagat
taa
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integrated database retrieval system
