Lottia gigantea (owl limpet): LOTGIDRAFT_138000
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Entry
LOTGIDRAFT_138000 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04080
Neuroactive ligand-receptor interaction
lgi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
LOTGIDRAFT_138000
04082 Neuroactive ligand signaling
LOTGIDRAFT_138000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lgi04040
]
LOTGIDRAFT_138000
Ion channels [BR:
lgi04040
]
Ligand-gated channels
GABA-A
LOTGIDRAFT_138000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
20233982
NCBI-ProteinID:
XP_009046588
JGI:
138000
UniProt:
V4AFA2
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MYFDIVLITDGPVIVHADILLRSMGPISELDMVYSLDCYFRQTWVDQRLSLNISLENVSL
GIKILERIWHPDTVFYNGQNSYLHIITTPNKFLRISPDGGILYSQRLTIRANCMMNLKKF
PLDIQQCPLYFGSFAYSTSDVKYKWRGKLTSPVDIYPHLTLSTFDLIGYPMTNYTSMVKG
EYHSVLAVKFYLRRHAGYFIIQVYVPCALLVVLSWVSFWINREATADRIALGTTTVLTMT
ILGIENRNDFPKVSYITALDLYIAVCFVFVLSTTVEFAIVHSFTKYGTGEPILSESTDDD
ESEEEVTNFRKYFVFLFVRTCTTFWWLSLYKCCTYHIESIPCIMQQAFYVYNLADGPCKI
LHKLNSSPFYINNYYLIGCLPSALLS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtactttgatattgttctgattacagacggtcctgtcattgttcatgctgatatattg
ttaagatcaatgggaccaatttcagagctagacatggtatattccttggattgctatttc
cgacaaacatgggtggaccaacgcttgtctctgaatatatcattagaaaatgtttcactt
ggcatcaaaatcttggagagaatctggcatcctgatactgtcttctacaatggacagaat
tcctatctacatatcatcacgactccaaataaattcctgcgaataagtcctgatggtgga
attctttattcgcaaagactgacgattcgagctaattgcatgatgaatctaaagaagttc
ccactggatattcagcaatgtccgctttattttggaagttttgcttactccacttctgat
gtgaaatataaatggcgagggaagttgacgtcaccagtagatatttatccccatctaacc
ttatccacttttgatctgattggttatcctatgacaaattataccagcatggtgaaagga
gaataccattcagtactagcagtgaagttttatttaagacgacatgctggatattttatt
atacaagtgtatgtaccatgtgccttactcgttgttctctcttgggtatctttttggatc
aacagggaagctactgctgatagaatagctctaggaacaaccacagttttaacgatgacc
atattgggcattgaaaatagaaacgactttcctaaagtatcgtatattactgccctagat
ttatacatagcggtttgttttgtgtttgtattgtcaactactgtagaatttgctatagtt
cattccttcactaaatatggtacaggtgaaccaattttatcagaatctacagatgatgac
gagagcgaagaagaggtaacaaactttcgaaaatattttgtctttttatttgtaaggacg
tgtaccaccttctggtggctaagtctatataaatgctgcacatatcacattgaatctatc
ccctgcataatgcagcaagcattttatgtatataatttggcagatggcccatgtaagatt
cttcacaaactcaattcatctcctttttacatcaataactattacctgattggttgtctc
ccttccgcgttactgtcatag
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