Lottia gigantea (owl limpet): LOTGIDRAFT_139814
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Entry
LOTGIDRAFT_139814 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lgi01100
Metabolic pathways
Module
lgi_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
LOTGIDRAFT_139814
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lgi01003
]
LOTGIDRAFT_139814
Enzymes [BR:
lgi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
LOTGIDRAFT_139814
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
LOTGIDRAFT_139814
Glycosyltransferases [BR:
lgi01003
]
Glycan extension
O-Glycan
LOTGIDRAFT_139814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF7164
Glyco_transf_21
Motif
Other DBs
NCBI-GeneID:
20234233
NCBI-ProteinID:
XP_009048134
JGI:
139814
UniProt:
V4B1K6
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MLMAVMTSRKFLETRALDIHETWGSRVPGSILYFVGDAETYAGDLPVVTLNNINDTSYPP
QRKSFTMIEFISKTLTDHYEWFVRSDDDIYIRTDKLELLLRRLDSSKAWYIGQPGYGLKH
ERGKLGLVKPFCMGGVGITFSRSVLVEVGKHLVSDCLNNTVTTHEDTELGRCIYKFTGLP
CTTSSKVGELKILFNSAIRRTNGRCDWLEVGAITLHPIKVHPHMLRIDSLYSDLKVQQLV
QKMNSLQQEIFDSDETLKTKMGTLMTTAGDVEILDDDVVLGSDIAFKFENAPESRAKIED
LPRLIEKEIEYEWDSLDWRNRRLNTQGSEYHKTKMYFTSSIFIPKIATELEIKYGSKLEF
KKLLPFIYLRLKSGTDIEFILQHKDNNNKKHLIKTIQKFSGIQFREMMPLPHPETWIILP
LLGRSIEYRRFLDTLVRAVEKNGKLIKLKVVLYEDGGGQFRLTQKISNHFRNSSKNLSIL
TILTKGPFSRGRAISKGVEQLSLNSLLIFMDVDMYIDEYFLHRAVLNTIRGKQVWFPICF
SQFNPIIACYRKHHCSMENNHGDDFGLWREFGFGIASMYRQDLIKVGGFNLKIQGWGRED
QELYEKIIQRSDLHVLRTVDPSLIHIYHEKSCNREELGDKFTDCLGSKLSLYGNMDTLAT
IVMDLRVIKV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggccgtgatgacctctagaaagttcctcgaaacaagagcattggatattcat
gaaacatggggttcgagggtaccaggaagcatcctttatttcgttggagatgctgaaacg
tacgctggtgatctacctgtagtgacgttaaacaatatcaacgatacttcttatccacca
caacgcaaatccttcaccatgatagaattcatctccaaaacattaacagatcattatgag
tggttcgtgcgttcggacgatgacatatatatccgcacggacaagctggaactcttgctc
aggcgactggacagttcaaaggcctggtatatcggacagccaggctatggtttaaagcat
gaaagaggcaaacttggattggttaagccattttgtatgggcggcgtgggaatcactttt
tcaaggagtgtgttagtggaggtcggaaaacaccttgtttcagattgtctgaacaatacg
gttacgacacatgaggacacagagcttggtcgctgcatctacaaatttactggcctgcct
tgtaccacttcttcaaaggtaggggaactcaaaatattgtttaactcagctatacgtcga
acaaatggtcgttgtgattggctggaagtgggcgccattactcttcatcccataaaggtt
catcctcatatgctgaggatagactctctttactccgatctcaaagttcaacaacttgta
caaaaaatgaacagtttacaacaagaaattttcgattcggatgagactttgaagaccaag
atggggacattgatgactactgcaggcgatgttgagattctggacgacgatgtggttttg
gggtcagatatcgcatttaaatttgaaaatgcacccgaatcccgtgcaaagatagaggac
ctacctagactcattgaaaaggagatagagtacgaatgggattctttagactggaggaac
cggcgtctgaatactcaaggtagcgaataccacaaaacaaagatgtacttcacttcatct
atttttattcctaaaatagccactgagctcgaaatcaaatacggttcaaagttggaattc
aaaaaattgttaccgtttatctacttgcgtcttaaatcaggaacggatatagagttcata
cttcaacacaaagacaacaacaacaagaagcatctcataaaaactatccaaaagttttct
ggtatacaattccgagagatgatgccgcttccacaccctgaaacctggatcatcctgcca
ctgttggggagatcaatagaatatcgacgatttttggacacgttggttcgagctgttgaa
aagaatggaaagttgatcaagctgaaggtagtgctttacgaagatggcggaggccaattc
cgtctgacgcaaaagatctcaaatcatttccggaactcttccaaaaatttgtcgatcctg
acaattctaactaaaggaccattttcgcgaggacgagccatatccaaaggagttgagcaa
ctgtcgttgaattctctgttgattttcatggacgtagacatgtacattgacgagtacttt
ctccaccgcgcagtactcaacactatccgaggcaaacaggtctggtttcctatctgcttc
agtcaattcaatccgataatcgcgtgttacagaaagcatcattgctcaatggagaacaat
cacggagacgatttcggtctgtggcgagaatttggattcgggattgcatccatgtacaga
caagacttgatcaaagttggcggattcaatttaaaaatccagggatggggtagagaggat
caggaattgtatgaaaagattattcagagatccgacctgcacgtgttaaggacagttgat
ccttccttaatacatatatatcacgaaaagtcatgtaaccgagaagagctgggagacaaa
tttacggattgtcttggatccaagttgtctttgtatggtaacatggatactctagcgact
attgtgatggatttaagagtgataaaggtatga
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