Lottia gigantea (owl limpet): LOTGIDRAFT_141409
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Entry
LOTGIDRAFT_141409 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_141409
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
LOTGIDRAFT_141409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
LRR_At1g61320_AtMIF1
F-box
Motif
Other DBs
NCBI-GeneID:
20234432
NCBI-ProteinID:
XP_009049445
JGI:
141409
UniProt:
V4B0V8
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MASQIPGNHLGQAGSSTENSTNNEDSESKCWRPETLESKTKLVDNGSSETSGNKLVTDLA
SLNISQNTALHKIGEQPSENSLTHSIHKQTTDIYISDLPECVLLRIFHFVDIRTLILVIR
KTCRFWHYLSYDRPKLEELDLTGADKLTYSGFETLKKDVHSLTHLSIAYTMIDDKGLKVI
AENSPKLKLLNIKSCVNISDVGIGYVASHCKELESLLVNKTDPEEKGCSMSSFGLETLAL
GCCKLKTLCISYCHLIDDKCIIAVASNCLGLTELRLAGCVSITDASLMALGEHSRYLKDL
ESHNSIDVTKNTLIRLQNHSHLQSLHLSFCTRITNDTIIEIAKHCPDLQELSLRGCNLIT
DIAIASLVNSCAFLRILDLSGESCFFAMKISNVSLSAIANDCKYIERLMVSKNKLINLSG
LEVLFSRCKSLESLELTVGEPMYTSFSGVMSLVNNIKNRIVKIANHTQIIANKQSGTLHI
EFYPNAESNILNKTGGDDDLCMSSSSLTE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcagattccaggaaatcatctaggacaagctggcagttctactgagaattca
actaacaatgaagattcagaatcaaaatgctggagaccagagactttggagtcaaaaact
aaattggtggacaatggttcttctgaaacttctggaaacaagctagtcacagatttggca
tcattaaatattagtcaaaacacggcattacacaagattggagagcagccatctgaaaac
tctttaactcactctatacacaaacaaactaccgatatttatatttctgatcttccagaa
tgtgtgttattgagaatatttcattttgtggatattcgaacattgatattggtcatcaga
aaaacttgtcgtttttggcattacttgagttatgatcgtcccaaattggaagaacttgat
ttgactggtgctgataagctcacttactctggatttgaaacgctcaagaaagatgttcat
agtttgacacatctgagtattgcctacacaatgattgatgataaaggactgaaagtaatt
gctgaaaattctccaaagttgaaattgctcaatattaagtcgtgtgtgaatatttctgat
gttggaattggatatgttgccagtcattgtaaagaactggaaagcctcttggtcaataag
actgatcctgaagagaaaggttgctcaatgagcagttttggacttgagacattagctcta
ggttgttgcaaattgaaaactctatgtatcagttattgccatttaatagatgataaatgt
attattgctgttgcttccaattgtcttggactgacagagttgagacttgcaggctgtgta
tctattacagatgcatctctaatggctttgggtgagcattctcgatatctaaaagattta
gaatctcataactctatagatgttactaaaaatacattgatacggctccagaaccattca
catcttcaatcactgcatctgagtttctgcaccagaattaccaacgacactattattgag
atcgcaaaacactgtccagatttgcaggaactatctttacggggttgtaatcttatcacg
gacattgccattgcttccttggtaaattcttgtgcatttctacgcatcttggatctttct
ggtgaatcatgtttcttcgccatgaagatatccaatgtgtcgctttcggctattgctaat
gactgtaaatatatagaaagattaatggtatccaaaaataaattgatcaacctctccggg
ttggaggtcttgttttctagatgtaaaagtttagagagtttagagttgactgtgggtgaa
ccaatgtatacctcgttcagtggagtcatgagtctcgtcaataacatcaagaacagaatt
gtcaaaattgcaaaccatactcagatcattgctaataaacaaagtggtactcttcatatt
gaattctatcccaacgctgagagcaacattctgaataaaactggcggtgatgatgatctg
tgtatgtcatcctcttcattgactgaataa
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