Lottia gigantea (owl limpet): LOTGIDRAFT_143930
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Entry
LOTGIDRAFT_143930 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K23195
transcriptional repressor CTCF
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgi03000
]
LOTGIDRAFT_143930
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_143930
Transcription factors [BR:
lgi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
LOTGIDRAFT_143930
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
LOTGIDRAFT_143930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_7th_ZNF462
zf-H2C2_5
Zf-C2H2_ZNF451_C
zf-C2H2_2
zf-C2HE
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_15
DUF7129
zf-C2H2_11
zf-met
zf-C2H2_2nd_ZNF462
zf-C2HC_2
Zn_ribbon_PriA
Motif
Other DBs
NCBI-GeneID:
20234762
NCBI-ProteinID:
XP_009052735
JGI:
143930
UniProt:
V4C4U6
LinkDB
All DBs
Position
Unknown
AA seq
327 aa
AA seq
DB search
MGSPDGENIVDGKALSLDLSGYEFKEEDREVTEELVEEDGKTRRILRITPKTAFVSGVGG
QMMCSYCNYTSPKRYLLTRHMKTHSEDRPHKCHICGRGFKTLASLTNHVNTHTGVRPHKC
KLCESAFTTSGELVRHVRYKHTFEKPHKCTLCEYASVELSKLKRHMRSHTGERPYQCPHC
TYASPDTYKLKRHLRIHTGEKPYECMVCHARFTQSNSLKAHKLIHTGTKPIFQCEFCPTT
CGRRTDLKIHVQKLHNSEHPLLCRKCNQTFPDRYTYKIHLKSHEGEKCFKCDICGHAAIS
QRHLETHQLIHSGEKPYECESCDHSFR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgggttctccagatggtgaaaatattgttgatggtaaagctttatctcttgatctgtct
ggctatgaatttaaggaggaagatagagaggttactgaagaattggttgaagaagatggg
aaaacaagaagaatcttaagaataacaccaaaaacagcatttgtaagtggtgttggtggt
caaatgatgtgttcatattgtaactacaccagtcctaaaagatacttgcttaccagacac
atgaaaactcactctgaagaccgtcctcacaaatgtcatatttgtggtagaggtttcaaa
acacttgcatctcttaccaatcatgtcaatacccatacaggagtcagacctcataaatgt
aagctatgtgagtcagcattcaccacctctggagaattggttcgacatgtgcgatacaaa
cacacctttgaaaagcctcacaaatgtacactctgtgaatatgctagtgtagaattgagc
aaattgaagcgacatatgaggtctcatactggtgaaagaccttatcaatgtccacattgc
acgtatgcgtctccagacacatataaacttaagagacatcttcgtattcatactggtgaa
aaaccttatgaatgcatggtgtgtcatgctagatttacacagagtaacagtctgaaggca
cataaactaattcatactggaacaaaacctatttttcaatgtgaattttgtcctactaca
tgtggaagaagaacagatttgaagatccatgtgcaaaaacttcacaacagcgaacaccct
cttttgtgtagaaaatgtaatcagacctttccagatagatacacatataagatccatcta
aaatctcatgaaggtgaaaaatgctttaagtgtgatatatgtggacatgcagccatttct
caacgtcatcttgaaacccatcaacttattcattctggggaaaagccttatgaatgtgaa
tcttgcgatcattctttcagg
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