Lottia gigantea (owl limpet): LOTGIDRAFT_154947
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Entry
LOTGIDRAFT_154947 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi00860
Porphyrin metabolism
lgi00970
Aminoacyl-tRNA biosynthesis
lgi01100
Metabolic pathways
lgi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LOTGIDRAFT_154947
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LOTGIDRAFT_154947
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lgi01007
]
LOTGIDRAFT_154947
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgi03016
]
LOTGIDRAFT_154947
Enzymes [BR:
lgi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
LOTGIDRAFT_154947
6.1.1.17 glutamate---tRNA ligase
LOTGIDRAFT_154947
Amino acid related enzymes [BR:
lgi01007
]
Aminoacyl-tRNA synthetase
Class I (A)
LOTGIDRAFT_154947
Transfer RNA biogenesis [BR:
lgi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LOTGIDRAFT_154947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1c
WHEP-TRS
ProRS-C_1
tRNA-synt_2b
tRNA-synt_1c_C
HGTP_anticodon
tRNA-synt_1c_C2
Arc1p_N_like
GST_C_3
GST_C
Motif
Other DBs
NCBI-GeneID:
20236461
NCBI-ProteinID:
XP_009063700
JGI:
154947
UniProt:
V4B9C1
LinkDB
All DBs
Position
Unknown
AA seq
1445 aa
AA seq
DB search
MKHTVFKVDHWTTFAKGRLACTSDFPLAVEYLNTALSSITYLVGHSITLADFFVWDTLYS
SNLWQKMIVKKDCPVNVLRYYKFLSNDELFKSVLPQLPKVSVQNDNESSIKKDEGKFVEL
PGAKMGEVVVRFPPEASGYLHVGHAKAALLNQYYQQSFNGTLIMRFDDTNPAKENAEYEK
VILEDLKLLGIKYDKFSHTSDHFDSLLQYCEEMIKKKKAYVDDTEPEVMKQEREERIDSK
HRSNSVEKNLKMWEDMKKGTDYGIKCCVRAMLDMKSDNGCMRDPTIYRCKPEPHIKTGDK
YKVYPTYDFACPIVDSVEGVTHALRTTEYHDRDDQYFWFIDALGLRKPYIYEYSRLNLQN
TVMSKRKLTWFVNEGLVDGWDDPRFPTVRGVLRHGMTVEGLKQFIISQGSSRSVNMMEWD
KIWSVNKKVIDPIVPRYTALLKDDVVPLIIKEAKTESKQVAAHPKNKEVGEKTVWYGNKI
YIEGADAKVIKEGEIVTFINWGNLKIKTIKKNSKGEIESIEADLDLANTDYKKTQKITWL
CDCKEGELIPTVCIQYDHIITKPVLAKDEDFKSYINTDSKKEEVMLGDPCLSSLKKGDMI
QLQRRGYYICDQPYQPISANTGKASPCVLLSIPDGHQKEMPTAGSKHKAEVSAKEKVYGK
DWKPDLKIEAVSSTTAGSAAPATSNNNDDVVKLNQQIKDQGNIVRELKSAKAEKSKIDEA
VKMLLSLKGDFKKVYGKDWKPDLKIEAVSSTTTAAPSNGDHDLNKWNQQITDQGNKVRDL
KSKKADKGVVGDAVKVLLDLKDKFKKIFGSDWKPSNTPATPTTPQPTPSSDMAATTESPQ
ALDLKSKIDKQGEVVRNLKSSGGSKDAIDKEVKTLLSLKSDYKTLTGEDVPGAAPKKNKK
DKGKDKENKDKSKDKPKEIKKEENKEDDSREVKKITRSVLMKYFRLGLEATKEENLPDWY
SQIITKAELIEYYDVSGCYILRPGAYAIWEMIKDFFDGEIKKLGVENCYFPMFVSQAALE
KEKEHIADFSPEVAWVTKCGQSKLAEPVAIRPTSETVMYPSYAKWVKSHRDLPLKLNQWC
NVVRWEFKHPQPFLRTREFLWQEGHTAFATRKEAEEEVLTILELYARVYEDLLAIPVVRG
KKTEKEKFAGGDFTTTVEAYISASGRAIQGATSHHLGQNFSKMFEIVFDDPETQEKTFAH
QNSWGLTTRTIGVMVMVHGDNKGLVVPPRVSQIQAIVVPCGITANLPEADMNNLMSKCED
LSKSLIAGGIRSRTDLRDNYSPGWKFNHWEVKGVPIRVELGPRDIKQKTVVAVRRDTGEK
ITLKQDNIAKQITDLLDTIQSSLYNKAKKEMDEHMVLSKDWDEFCNALDKKFIIQAPFCG
EIPCEEKIKKDSARDVQVEEGAPAMGAKGLCIPFKPMAELKPKTKCILPNCNKEAKFYTL
FGRSY
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatacagttttcaaagttgatcattggacaacgtttgctaaaggtcgactggct
tgtacatctgattttccattagctgtagaatatttaaacacagcactatcatctataact
tatttagttggtcattctattacactggctgatttctttgtttgggatactttatattca
agcaatctgtggcagaagatgattgttaagaaagattgtccagtgaatgtgttaagatat
tacaagtttctgtctaatgatgaactgttcaaatctgtattaccacaactacctaaagtt
tctgtacagaatgataatgaaagttctattaagaaagatgaaggaaagtttgtagagtta
ccaggtgctaaaatgggagaagttgttgttagatttcctcctgaagctagtggatattta
catgttggccatgctaaagctgctctactcaatcaatactatcaacaaagttttaatggt
acattgattatgagatttgatgatactaatcctgctaaagaaaatgctgaatatgaaaag
gttattttggaagatttaaaattactaggaataaagtatgataaattctctcatacctca
gaccattttgatagtttattacaatactgtgaagaaatgatcaagaaaaagaaagcgtat
gttgatgatactgagcctgaagtaatgaaacaagaacgtgaagagagaattgattcaaaa
cacagatctaacagtgtggagaagaatttaaagatgtgggaagatatgaagaaaggtact
gattatggtattaaatgttgtgtacgagctatgttagatatgaagagtgataatggatgt
atgagagatcctactatatatagatgtaaacctgaacctcatatcaaaactggagacaaa
tataaagtatatcctacgtatgattttgcctgtccaatagttgatagtgttgaaggagta
actcatgctttaagaacaacagaatatcatgatagagatgatcagtatttctggtttatt
gatgctttaggtctaagaaaaccatatatttatgagtacagtagattaaatctacagaat
acagtgatgtctaaacgtaaattaacatggtttgttaatgaaggacttgttgatggatgg
gatgatccaagatttccaactgtaagaggtgttttaagacatggtatgactgtagaaggc
ttaaaacaattcattatttctcagggctcttcaagatctgttaatatgatggaatgggat
aaaatatggtctgttaataaaaaggtaattgaccctatagtaccaagatatactgcttta
ctaaaagatgatgtagtgcccttgataataaaagaagctaaaacagaatctaaacaagtt
gcagctcatccaaagaataaagaagtaggtgagaagacagtatggtatggtaataagatc
tatatagaaggtgctgatgctaaagttataaaggaaggagaaattgttacctttattaac
tggggtaatttgaaaattaaaactattaaaaagaacagtaaaggtgaaatagaatctatt
gaggcagatcttgatttggcaaatactgattataagaagactcagaagataacatggtta
tgtgattgtaaggaaggagagttaatacctactgtttgtatacaatatgatcatattata
actaaacctgtactagctaaagatgaagactttaaatcttacatcaacacagattccaag
aaagaagaagtgatgttaggtgatccatgtttatcatcattaaagaaaggtgatatgata
caattacagagacgaggatattatatctgtgatcagccctaccaaccaatcagtgctaac
actggtaaggctagtccctgtgtgttattgagtatacctgatggacatcaaaaagaaatg
cctacagctggatcaaaacataaagctgaagttagtgctaaagagaaagtttatggtaaa
gattggaaaccagatttaaagattgaagctgtatcatcaacaacagctggatcagcagca
ccagcaacatcaaataataatgatgatgttgttaaattaaatcaacaaattaaagatcaa
ggcaatattgttagagaattgaagtctgctaaagctgaaaaaagtaaaattgatgaagct
gtaaaaatgttattgagcctaaaaggtgattttaagaaagtttatggtaaagattggaaa
ccagatttaaagattgaagctgtatcatcaacaacaacagctgctccatctaatggggac
cacgaccttaacaaatggaatcaacaaattactgatcaaggaaacaaagtccgagattta
aaatctaaaaaagcagataagggtgtggtaggagatgcagtaaaggttttattagattta
aaagataaatttaaaaagatatttggtagtgattggaaaccatctaatactccagccacc
ccaactactccacaaccaacaccatcttctgatatggcagctacaactgaatctccacaa
gctctagatttaaaaagtaaaatagataaacagggagaggtagtgagaaatctcaaatct
tctggaggcagtaaggatgctattgataaagaagtaaaaacattactaagtttaaaatca
gactataaaacattaactggtgaagacgtaccaggggcagctcccaagaaaaataagaaa
gataaaggtaaagataaagaaaacaaagataaatctaaagacaaacctaaagagattaag
aaagaagaaaacaaagaagatgattcaagagaagtaaagaaaataacaagatctgtattg
atgaaatattttaggttaggtttagaggcaacaaaagaagaaaatcttcctgactggtat
tcacagattataactaaagcagaattaatagaatattatgatgtaagtggatgctatata
ttaagaccaggagcctatgctatatgggaaatgattaaagattttttcgatggtgaaatt
aagaagttaggagttgagaattgttatttccctatgtttgtatctcaagcagctttagaa
aaagaaaaagaacatattgctgacttctcaccagaggttgcctgggtaaccaaatgtggt
caatctaaattagctgaaccagtagctatcagaccaaccagtgaaactgttatgtatcca
tcctatgctaaatgggtgaaatctcaccgtgatctaccattaaaactcaatcaatggtgc
aatgttgtgagatgggaatttaaacatccacagccattcttacgtactagagaattttta
tggcaggaaggtcacactgccttcgctacaagaaaagaagctgaagaagaggttttaact
atattagaactatatgctagagtatatgaagatctgttagctataccagtagtaagagga
aagaaaacagaaaaggagaaatttgctggtggtgattttactactacagtagaggcttac
atctcagctagtggaagagctatacagggagccacatctcatcatcttggtcagaatttc
tctaagatgtttgagatagtatttgatgatccagaaactcaagagaagacatttgctcat
cagaattcctggggtttgaccactagaactataggtgttatggttatggtacatggtgat
aataaaggactagtggtaccaccaagagtatcacaaatacaggctatagttgtaccatgt
ggtatcacagctaatctacccgaggctgatatgaataatctaatgagtaaatgtgaagat
ttaagtaaatcattaatagctggtggtataagatctagaacagatctgagagataattat
tctccaggttggaaattcaatcattgggaagtcaagggtgttccaataagagtagaatta
ggaccaagagatataaaacagaaaacagtagtagctgttagaagagatactggtgaaaag
atcacattaaaacaagacaatatagctaaacaaataacagatttattagataccatacaa
tcgagtctttataacaaagcaaagaaagagatggatgagcatatggtattgtctaaagat
tgggatgaattctgtaatgctctagataaaaagttcattattcaagccccattctgtggt
gaaataccatgtgaagagaagataaagaaagacagtgctagagatgttcaagtagaagaa
ggtgctcctgctatgggagcgaaaggtttatgtataccatttaaaccaatggcagaatta
aaaccaaaaacaaaatgtattcttccaaattgtaacaaggaagccaaattctatacatta
tttggtagaagttattag
DBGET
integrated database retrieval system