Lottia gigantea (owl limpet): LOTGIDRAFT_157371
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Entry
LOTGIDRAFT_157371 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04080
Neuroactive ligand-receptor interaction
lgi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
LOTGIDRAFT_157371
04082 Neuroactive ligand signaling
LOTGIDRAFT_157371
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lgi04040
]
LOTGIDRAFT_157371
Ion channels [BR:
lgi04040
]
Ligand-gated channels
GABA-A
LOTGIDRAFT_157371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
FixH
Motif
Other DBs
NCBI-GeneID:
20237347
NCBI-ProteinID:
XP_009047370
JGI:
157371
UniProt:
V4B8R3
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MSFLYLDHNTSELLDRLLQGYDKRLRPGFGGLPTRVKTDIMVRSMGPISEKKMAYSMDCY
FRQYWTDQRLSFNASVEPIAQVTLNVKMLNRIWFPDTVFLNGGHSYVHMITSPNKFVRLS
ANGSVYLSQRLTIKATCPMHLEKFPMDSQKCPLFVASFAYGSSDVFYEWRYGDLKAVSIA
GGMTMSQFDLINIEAGHFIEIFKGVPHSIVSVNFHLRRHTGYFLIQVYLPCCLLVVLSWV
SFWINREAASDRIALGTTTVLTMTFLALDSRDDLPRVSYSTALDVYVAMCFLFVFASIVQ
FAGIELQNSYQQNQHIRRTSSIVKHGFCPVCVQCLGKFLKCLMNTRNNKFKRHVRNALGL
NSVSKIDKVSRILFPVAFTTLNIVYWVSYLTH
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcctttatctggaccataatacatccgaactgttagatcgcttacttcagggt
tatgacaaacgacttcgaccaggatttggaggtttaccaactcgtgttaaaaccgatatt
atggtcagaagtatgggtccaatatcggaaaagaagatggcttactctatggactgctat
tttaggcagtattggactgatcagcgattgtcttttaatgctagtgttgaacctattgcc
caagttacactgaatgttaagatgctaaacagaatatggtttccagacacggtattttta
aatggtggtcattcgtatgttcatatgataacatcacctaataaattcgttaggctgtca
gcaaacggaagtgtttatttatcacaaagactaactattaaagcaacctgtccgatgcat
ttagaaaaatttcctatggattctcagaaatgtcctttatttgttgcaagttttgcttat
ggttcatctgatgtattttatgaatggaggtatggtgatttaaaggcggtgtctatagcg
ggcggtatgaccatgtcacaatttgatctcatcaatatcgaggctggtcatttcatagaa
attttcaagggtgttccacattctattgtgtcggttaattttcatctacgaagacacact
ggatattttcttattcaagtctatttaccatgttgtttattggttgttttatcttgggta
tctttctggattaacagggaggcggcttcagatagaattgcgctaggcacaacgacggtt
ttaaccatgacatttctagcattggacagtcgagatgatttgcctcgtgtgtcgtacagt
acagctttggacgtgtacgttgcaatgtgtttcttgttcgtgtttgcatcaatagttcaa
tttgctggcattgaacttcaaaacagctaccaacaaaatcagcatataagaagaacttcg
tctattgtcaaacatggattttgcccggtttgtgtccagtgtttaggaaaatttctaaag
tgtttaatgaacacaagaaataataagtttaaaagacacgttcgaaatgctcttgggtta
aacagtgtcagtaaaatagacaaagtttcacggattttatttcctgtggcattcacaact
ttaaatatcgtttattgggtatcctatttgacccattaa
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