Lottia gigantea (owl limpet): LOTGIDRAFT_159336
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Entry
LOTGIDRAFT_159336 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03022
Basal transcription factors
lgi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LOTGIDRAFT_159336
09124 Replication and repair
03420 Nucleotide excision repair
LOTGIDRAFT_159336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgi03021
]
LOTGIDRAFT_159336
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_159336
Transcription machinery [BR:
lgi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LOTGIDRAFT_159336
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LOTGIDRAFT_159336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
20238033
NCBI-ProteinID:
XP_009051917
JGI:
159336
UniProt:
V4A0H2
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MEELRNSSLLVIILDTNPIWWGQNITETGSSVCLSQCLNSLMVFANSHLMLSHYNKLAVI
AAHTNKSCFLYPLPKPPTAGNTTTVNDNDTTEGGEENAVKIPQMGENDGKYELFTEFNEN
LKTEIKDLILNDRLVGELYSDSLVAGAMSMAMQLDIHRIEKEAPIGENVSSRILVIKGSE
DNAAQYMNFMNAVFTAQKQNTVIDACILDNDSGLLQQACDITGGMYLKIPQISGLLQYLL
WVFLPDPIMRPKLTLPPKVQVDYRAACFCHRNLIDVGYVCSVCLSIFCAFNPICSTCQTT
FKFMGPPKILKKKSKKSAG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattaagaaatagtagtttattggtaattatacttgataccaatccaatatgg
tggggtcaaaatattacagaaacaggctcatcagtttgtttatcccaatgtctgaattct
ctgatggtttttgccaattcacatctaatgttgagtcattataataaactagcagttata
gctgctcacactaataaaagttgttttctgtatcccttacccaaaccaccgactgcgggt
aatacaactactgttaatgataatgacacaacagagggtggtgaagaaaatgctgttaaa
attccacaaatgggagaaaatgatggaaaatatgaactatttacagaatttaatgaaaat
ttaaagacggaaattaaagatctgattttaaatgatagattagtaggagaactttattct
gactctttagtagctggggctatgtctatggctatgcaattagatatccatagaatagaa
aaagaggctcccattggtgaaaatgtttcatcaagaattttggttattaaaggatctgaa
gacaatgctgctcaatatatgaactttatgaatgctgtatttactgcacagaaacagaat
acagttattgatgcatgtattttggataatgactctggtcttctacagcaggcttgtgat
ataacaggtggaatgtatcttaaaatacctcagatatctggtttactacaatatttactg
tgggtatttttaccagatcctataatgagacctaagttaaccttaccacctaaagttcag
gtagattatagagcagcgtgtttctgtcatcgtaatttaattgatgtaggttatgtttgt
tctgtatgtttgtcaattttctgtgcctttaatcccatctgttctacatgccaaactact
ttcaaatttatgggtccaccaaaaatattgaagaagaaatcaaagaagtcagcaggctga
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