Lottia gigantea (owl limpet): LOTGIDRAFT_159535
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Entry
LOTGIDRAFT_159535 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K23720
UV-stimulated scaffold protein A
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOTGIDRAFT_159535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_159535
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
LOTGIDRAFT_159535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
CaM-KIIN
KshA_C
Motif
Other DBs
NCBI-GeneID:
20238072
NCBI-ProteinID:
XP_009052298
JGI:
159535
UniProt:
V4AII2
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MASTSASCLDHNLCEEMSEYIEKITLSGQKTVDESLMKKLKKICRISDIYVKHAYHLLMS
TLEKDHAEIRLSCFKIIDELFNRSHCFRDLLVSEFQTFLELTVGINHDLPLPAPIAISRT
LRAETLKSIQQWFEKFGEAYKKLVLGYNFLKSCKMVDFNDIRNRTLAERRREEEIERKKR
IVLNQKLDKVLKEMTDMVPEIETCITEIENCLNLLVPKPDDFFILNEGDTDNDDYINHSA
LQLNSSVIETERMCTNNSEDPSGSKNSETNDNMPNESQVEDQSGENSDADSDNDSDMEPN
LNDQTAFVSDFGLGTRKYNLDIKISSDNFVIQETEDNKDIFRTLHDSVQLARKKYLLKFT
KWLEILTKAGENDDKVKHLVDLKSKLKTLVDKSVEMKLTKEAVAIESDEDEDSEFEEVPE
KEGYEAEVPLYLLTATEMGLKEDPKKKRGRKRTVKDWTMGNTSTSTDDPTSRAANLHKLG
ITDEHNQPSTSKTKHSKSQNSIPIVPFGPDIECWENQDKIEKPMVLKNDSSIWRPAEFEI
EKDSASKHDVKALTTRTFHYPGKFVPVSWSCRTPLPNGSLCQRMDREKCPFHGKIIGRDK
TGQPTSENDVELKIKEQLLKTEGKMADWRDHELEKDIEGALGIDLGSSSSKGKGKGKKKN
KKYENLTDVKEIKNTSRNRLEKKVFNRTAMKRVTSRLDAADYKRIRDKFGNQFNYAHK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgacaagtgctagttgtttagatcataatttatgtgaggagatgtcagaatat
atagagaaaataactctatctgggcagaaaactgtagatgagtcattaatgaagaaatta
aagaaaatttgcaggatatctgatatttatgtgaagcatgcttatcatttgttgatgagt
acattggagaaagatcatgctgaaataagactgtcctgtttcaagataatagatgaatta
ttcaatagatcacattgttttcgagatttacttgtttctgaattccaaacatttttagaa
ctaactgtgggaataaatcatgatttaccactacctgctccaattgcaatatctagaaca
ttacgagcagaaacattaaagtctatacagcaatggtttgagaagtttggggaagcctat
aaaaaattggttttgggatataacttcctaaaatcttgtaaaatggttgatttcaatgat
atccgaaatagaactctagctgaaagaagaagagaagaggaaatagaaagaaaaaaaaga
attgtcttaaatcaaaaattagacaaggttctgaaagaaatgacagatatggtccctgaa
attgagacatgtattactgagatagaaaattgtttaaacctgctggtacccaaacctgat
gatttctttattttgaatgaaggtgatactgacaatgatgattatataaaccacagtgct
cttcaactaaactcttcagttattgagactgaaaggatgtgcacaaataattctgaggat
ccaagtggttctaaaaatagtgaaactaatgataacatgccgaatgaatctcaggtagaa
gaccaatcaggtgaaaatagtgatgctgatagtgacaatgatagtgacatggaaccaaat
ctcaatgatcaaacagcatttgtgtctgattttggtcttggaacgcggaaatacaacctc
gatattaaaatcagttctgacaattttgtgatccaagaaacagaggacaataaagatata
ttcagaactttacatgattctgttcaactggcacggaaaaaatatttattgaaatttaca
aaatggttagagattttaacaaaggctggtgagaatgatgataaagtgaaacatttagtc
gatttaaaaagtaaattaaaaacattagtagataagagtgtagaaatgaagttaacaaaa
gaagctgtagcaattgaatcagacgaggatgaagattctgagtttgaagaagtaccagag
aaagaaggttatgaagctgaagtacctttatatctattaacagctacagaaatgggtttg
aaagaagatccgaagaaaaaaagaggcagaaaaaggacagttaaagattggacaatgggt
aatacttctacctccactgatgaccctacctctagagcagctaatcttcataaactagga
ataacagatgaacataatcaaccaagtacctccaaaactaaacacagtaaatctcaaaat
agtataccaattgttccttttggtccagatattgaatgctgggaaaatcaagacaaaata
gagaaacctatggtcctgaaaaatgattcctccatttggagaccggcagaatttgaaatc
gaaaaggattctgcatctaaacatgatgtaaaggctttaacaactcgaacctttcactac
cctggcaagtttgtaccagtttcatggtcttgtagaactcctttacctaatggttcactg
tgtcaaagaatggatagagaaaagtgtccatttcatggtaaaataataggcagagataaa
acaggtcagccaactagtgaaaacgatgttgaactgaaaataaaagagcagctgttgaag
actgaaggtaaaatggctgattggagagatcatgaactagagaaagacattgaaggagct
ttaggtatagatcttggttccagttcctctaaagggaaaggaaaaggcaaaaagaaaaat
aagaaatatgagaatttaactgatgtaaaagaaataaaaaatacctccagaaacagactg
gagaaaaaagtatttaataggacagctatgaagagagtaacttctagattggatgctgca
gattataaacgtattcgtgataaatttggaaatcagtttaactatgctcacaaataa
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