Lottia gigantea (owl limpet): LOTGIDRAFT_163304
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Entry
LOTGIDRAFT_163304 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
LOTGIDRAFT_163304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_163304
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
LOTGIDRAFT_163304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
T5orf172
FANCL_C
GWxTD_dom
Motif
Other DBs
NCBI-GeneID:
20239379
NCBI-ProteinID:
XP_009057648
JGI:
163304
UniProt:
V4BRP6
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
MVQEVEAFFGVYLLYNLNPKYKGRVYIGKTTDPNRRIHQHNTGAKAGGAWKTDGKGPWEM
VLIIHGFPEAVSALRFEWAWQHPKISRRIRHLPAKRKSEKSYDFHFRVVSEMLRTAPWNR
LALTIRWLNQEFRLDFSPTTPPPNHMPIEFGPIMCKKVGGKKKKTNEKTGDDESDSLMLE
FCDVCYKRIQKEDVKLSCLHPECFMKSHIICLARVFLGNADHVIPIEGQCPKCDAILMWG
ELVRQRQGCHRNLQKEV
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggttcaagaagtggaagctttcttcggggtttatctcctgtataatctgaaccccaaa
tataaggggcgtgtctacattggtaaaaccactgaccctaatagacgtatacatcaacat
aatactggggctaaagctggaggcgcttggaaaactgacggcaaggggccatgggaaatg
gtgctgataatccatggttttcctgaagctgtttcggccctcagatttgaatgggcatgg
cagcatcctaaaatttctagaagaattcgacaccttcctgctaaaagaaaatcagagaaa
tcttacgattttcatttccgtgttgtatcagaaatgttaagaactgctccttggaatcga
ttggctttgacgatacgttggttaaatcaagagttccgattggatttctcacctacaact
cctccccctaatcacatgcccattgagtttggaccaatcatgtgtaagaaggtgggaggt
aaaaagaagaagaccaatgaaaagacaggagatgatgagagtgacagtttgatgctggag
ttttgtgacgtctgttataaaagaattcagaaggaagacgtaaaattgagttgtttacac
ccagaatgtttcatgaagtcacatattatatgtctggcacgagtgttcctaggcaacgct
gatcatgtgataccaattgaaggccagtgtcctaaatgtgacgccatattgatgtgggga
gagctagtccgccagcgtcaaggttgtcatagaaatcttcagaaagaggtatag
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integrated database retrieval system
