Lottia gigantea (owl limpet): LOTGIDRAFT_165837
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Entry
LOTGIDRAFT_165837 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LOTGIDRAFT_165837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_165837
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_165837
Messenger RNA biogenesis [BR:
lgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LOTGIDRAFT_165837
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
Pre-60S particles
RNases
LOTGIDRAFT_165837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
20240193
NCBI-ProteinID:
XP_009061130
JGI:
165837
UniProt:
V4A4C0
LinkDB
All DBs
Position
Unknown
AA seq
186 aa
AA seq
DB search
MSTSTGNKSERLIWIDLEMSGLDIEKERIIEIAAIVTDADLNVIAEGPNIIIHQDQSLMD
SMGKWCKDHHGASGLTKSVLESKISESDAENKVLDFLKEHTDAGKCPLAGNSIACDKMFL
MKYMPNLTKHFHYRLVDVSTIKELCRRWYKQVYDDSPPKSLKHRALDDIKESIKELKYYR
EKIFVK
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgtctacatccactggaaacaaatccgaacggctcatctggatagatttggagatgtct
ggtttagatatagagaaagaaagaataatagaaatagcagccattgtgacagatgctgat
cttaatgtcattgctgagggaccaaatataatcattcatcaagaccagtcattaatggat
agcatgggaaaatggtgtaaagatcaccatggagcatcaggactaacaaagtctgtattg
gagagtaaaattagtgaaagtgatgcagaaaataaagttttagactttttaaaagaacac
acagatgctggaaaatgtcctttagcagggaactcaattgcttgtgataagatgttctta
atgaaatacatgcctaatttaaccaaacattttcactataggctagtagatgttagtact
atcaaagaactatgcaggaggtggtataaacaagtttatgatgattctcctccgaagtcc
ctgaaacacagggctttggatgacatcaaagaaagcatcaaagaactgaaatattacaga
gaaaaaatatttgtgaaataa
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