Lottia gigantea (owl limpet): LOTGIDRAFT_166003
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Entry
LOTGIDRAFT_166003 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgi03021
]
LOTGIDRAFT_166003
Transcription machinery [BR:
lgi03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
LOTGIDRAFT_166003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Spectrin_Anc-1_2
Zn_ribbon_RRN7
C2H2-zf_KIN17
Motif
Other DBs
NCBI-GeneID:
20240233
NCBI-ProteinID:
XP_009061297
JGI:
166003
UniProt:
V3ZAI8
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MPTCTQCGGDDFFEDCGNFYCQVCQVQSQDIRVEETEFEDVHNLILTRTPAPVSQTVEPQ
EEKNFGRPWTIQEGYQCVMKKQVEALIELGADPKLDEVVFRLWAAYLSSIEIAFCKKEKL
IPSSTHLLARARETSCGPISRPVVYKPQKKYHSRAESKRQIDDLEITQELGSEEFYLGDH
PVEEDFILRQQKRADPTTFLPVRSRLKYKVEWMNLAETLSFIYLGLLFTSNHITPSEIIR
LVRIKYTFRNHQVSQKTPSYIISLIETDRIPYKSAISCLNQDMKISSHDAYLFNSKTLPT
TEGLRCITGRLVRFLGIYELPPLPIDIITNNLLLKLDLPGEMNCLVFNLMKKVEPDVTIG
DDIKDIEMISACYIIMVLKLYFGVNDSREHTLTVCARQLSKLFPDDNWFVWEEWQSHISS
KYRIKQQILSSNDLGENLERITDVEEFVNLYKHSHSGKNNIVFRQKNRCKGIDEINNTLT
ELAQKARKTENEQESSQENDTSVDLLNSLLSNESEEQNELIAIRLRSSSIHYLKSSNINY
GKQDDVMLSPSTQFSPSGSVQNTDNEDVLTSSNPQNHEKGGNIQHFNTQNLDVDQCEELK
KILEKIQEDSGIYSEFRDQVPNRTQKLFKTRKFERHISYEWLLSVFCKISKCRLDKLERF
LKHFEHFVMEGSVTSVTAEQKFFRNKFLKVKKKERDVKSLNDSTDSSSDLSSTSKHHNSR
HHHLFD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcctacatgtactcaatgtggaggagatgatttttttgaagattgtggcaatttttat
tgtcaagtctgtcaggttcagtcacaggatattcgagtagaagaaacagaatttgaagat
gtccacaatcttattttaacaaggactccagctcctgtctctcaaactgttgaacctcaa
gaggaaaaaaactttggacgtccatggacaatacaagaaggttatcagtgtgtcatgaag
aaacaagttgaagccttgattgaacttggtgctgatcccaaacttgatgaagtagtattt
agattatgggcagcatatttaagttcaatagaaattgcattctgtaaaaaagaaaagttg
attccatcatcaactcatttactagccagagcacgagaaacctcatgtgggcctatatct
agacctgttgtatataagcctcagaaaaaatatcattcaagagctgaatcaaaacgtcaa
atagatgaccttgaaattacccaagaattaggtagtgaagaattttaccttggtgatcat
ccagttgaagaggatttcattttacgacagcaaaaaagggcagatccaacaacattttta
cctgtaagaagtcgtttaaagtataaagtggagtggatgaatttagctgaaacattatca
tttatatatcttggtttattatttactagtaatcatattacaccttcagaaatcatcagg
ttagtcagaataaaatacaccttcagaaatcatcaggttagtcagaaaacaccttcttat
atcatcagtttaatagaaactgatagaattccttataaatcagccatcagttgtctgaac
caagatatgaaaatctcttcccatgatgcttatctatttaatagcaaaactttgccaaca
acagaaggcttgagatgtataactggacgtttagtaagatttttaggaatatatgagtta
ccacccttgccaatagacatcataacaaataatctgctcctcaagttggatctaccaggt
gaaatgaactgtttggtatttaatctaatgaagaaagtagaacctgatgttactattggt
gatgatatcaaggatattgaaatgatatcagcttgttatattattatggtgttaaaatta
tattttggtgtcaacgactcaagagagcatacgttaactgtatgtgctagacaactatct
aaactatttccagatgataactggtttgtttgggaggaatggcagagtcatatatcatct
aaatatagaataaaacaacagatattgtcatctaatgatttaggagaaaatctagaaagg
attacagatgttgaggaatttgtaaatttatataaacattcacattctggtaaaaataac
attgtttttaggcagaaaaacagatgtaaaggaattgatgaaattaacaacacattaaca
gaactagcccaaaaggcacggaaaactgagaatgaacaagaaagctcacaggaaaatgac
acttctgtagatttactgaatagtttgttgtcaaatgagtcagaggaacaaaatgaatta
atagctattcgtcttagatctagttctattcattatctcaaatcatcaaacattaattat
ggtaaacaagatgatgtaatgctatcaccatctacacagttcagtccatcaggttcagtt
cagaacaccgacaatgaggatgttcttacttcatccaatccacagaaccatgagaaggga
ggtaatatacaacacttcaacacccaaaatttggacgttgatcagtgtgaggaactcaaa
aagattttagaaaaaattcaggaagattctggcatttattcagaatttagagaccaagtt
ccaaatcgaactcaaaaactttttaagacgcgcaaatttgaacgacatatttcatatgaa
tggttgctaagtgtgttttgtaagatttcaaaatgtcgtctggataaactggaaagattt
ttaaaacatttcgagcattttgtaatggagggatcagtgacttctgttacagccgagcaa
aaatttttcagaaataaatttttaaaggttaagaaaaaagaaagagatgtgaaaagtttg
aatgattcaacagattcttccagtgatctctcatctacatccaaacatcataattcaagg
catcatcatttgtttgattaa
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